Difference between revisions of "CHONDROITIN-4-SULFOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN0-5144 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.61 ec-2.1.1.61] == Reaction formula == * 1 S-...")
(Created page with "Category:reaction == Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** chondroitin 4-sulfotransferase * ec-number: ** [http://...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5144 ==
+
== Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** chondroitin 4-sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.61 ec-2.1.1.61]
+
** [http://enzyme.expasy.org/EC/2.8.2.5 ec-2.8.2.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-Containing-5AminoMe-2-ThioUrdines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-Containing-5MeAminoMe-2-ThioU]][c]
+
* 1 [[Chondroitin-N-acetyl-galactosamines]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13939]]
+
* Gene: [[SJ00043]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7892]], tRNA-uridine 2-thiolation and selenation (bacteria):
+
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages):
−
** '''3''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115775
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19570 19570]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16102 16102]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00601 R00601]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02180 R02180]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PJ66 Q9PJ66]
+
** [http://www.uniprot.org/uniprot/Q9NPF2 Q9NPF2]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.1.61}}
+
{{#set: common-name=chondroitin 4-sulfotransferase}}
 +
{{#set: ec-number=ec-2.8.2.5}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • chondroitin 4-sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6567, chondroitin sulfate biosynthesis (late stages):
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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