Difference between revisions of "CHORISMATE-SYNTHASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-12615 == * direction: ** left-to-right * common-name: ** xanthine oxidase (superoxide-forming) * ec-number: ** [http://enzyme.expasy.org/...") |
(Created page with "Category:reaction == Reaction CHORISMATE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** chorismate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction CHORISMATE-SYNTHASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** chorismate synthase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.2.3.5 ec-4.2.3.5] |
== Reaction formula == | == Reaction formula == | ||
| − | * | + | * 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''=>''' 1 [[CHORISMATE]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | + | * Gene: [[SJ00821]] | |
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| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | |||
| − | *** Source: [[ | ||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: | ||
| + | ** '''6''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| + | * METANETX-RXN : MNXR96709 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21021 21021] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01714 R01714] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P27793 P27793] | ||
| + | ** [http://www.uniprot.org/uniprot/P23353 P23353] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JT81 Q9JT81] | ||
| + | ** [http://www.uniprot.org/uniprot/Q58575 Q58575] | ||
| + | ** [http://www.uniprot.org/uniprot/P43875 P43875] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PM41 Q9PM41] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9CET2 Q9CET2] | ||
| + | ** [http://www.uniprot.org/uniprot/P28777 P28777] | ||
| + | ** [http://www.uniprot.org/uniprot/Q42885 Q42885] | ||
| + | ** [http://www.uniprot.org/uniprot/Q42884 Q42884] | ||
| + | ** [http://www.uniprot.org/uniprot/P16280 P16280] | ||
| + | ** [http://www.uniprot.org/uniprot/P12008 P12008] | ||
| + | ** [http://www.uniprot.org/uniprot/O74413 O74413] | ||
| + | ** [http://www.uniprot.org/uniprot/Q12640 Q12640] | ||
| + | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=chorismate synthase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.2.3.5}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:22, 18 March 2021
Contents
Reaction CHORISMATE-SYNTHASE-RXN
- direction:
- left-to-right
- common-name:
- chorismate synthase
- ec-number:
Reaction formula
- 1 3-ENOLPYRUVYL-SHIKIMATE-5P[c] => 1 CHORISMATE[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ00821
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
- 6 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
