Difference between revisions of "CHORISMATEMUT-RXN"

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(Created page with "Category:reaction == Reaction RXN-3701 == * direction: ** reversible * common-name: ** geranylgeranyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.60 ec-2...")
(Created page with "Category:reaction == Reaction 1.5.1.15-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.15 ec-1.5.1.15] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-3701 ==
+
== Reaction 1.5.1.15-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
 
** geranylgeranyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.5.1.60 ec-2.5.1.60]
+
** [http://enzyme.expasy.org/EC/1.5.1.15 ec-1.5.1.15]
** [http://enzyme.expasy.org/EC/2.5.1.59 ec-2.5.1.59]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c]
+
* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ04802]]
+
* Gene: [[SJ02922]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ18424]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ06255]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00009]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2201]], folate transformations I:
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
+
* RHEA:
{{#set: common-name=geranylgeranyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22893 22893]
{{#set: ec-number=ec-2.5.1.60|ec-2.5.1.59}}
+
* LIGAND-RXN:
{{#set: nb gene associated=4}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01218 R01218]
{{#set: nb pathway associated=0}}
+
* UNIPROT:
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P18155 P18155]
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
** [http://www.uniprot.org/uniprot/P13995 P13995]
 +
** [http://www.uniprot.org/uniprot/Q02046 Q02046]
 +
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
 +
** [http://www.uniprot.org/uniprot/Q48977 Q48977]
 +
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-1.5.1.15}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction 1.5.1.15-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2201, folate transformations I:
    • 9 reactions found over 10 reactions in the full pathway

Reconstruction information

External links