Difference between revisions of "CHORISMATEMUT-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] == * direction: ** left-to-right * common-name: ** orotidine-5'-ph...")
(Created page with "Category:reaction == Reaction CHORISMATEMUT-RXN == * direction: ** reversible * common-name: ** chorismate mutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.5 ec-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] ==
+
== Reaction CHORISMATEMUT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** orotidine-5'-phosphate decarboxylase
+
** chorismate mutase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.23 ec-4.1.1.23]
+
** [http://enzyme.expasy.org/EC/5.4.99.5 ec-5.4.99.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OROTIDINE-5-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02816]]
+
* Gene: [[SJ00045]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02815]]
+
* Gene: [[SJ07700]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
+
* [[PWY-3461]], L-tyrosine biosynthesis II:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
+
* [[PWY-6120]], L-tyrosine biosynthesis III:
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
+
* [[PHESYN]], L-phenylalanine biosynthesis I:
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7626]], bacilysin biosynthesis:
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-3462]], L-phenylalanine biosynthesis II:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[TYRSYN]], L-tyrosine biosynthesis I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6627]], salinosporamide A biosynthesis:
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR96708
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11597 11597]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13900 13900]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00965 R00965]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11172 P11172]
+
** [http://www.uniprot.org/uniprot/P19080 P19080]
−
** [http://www.uniprot.org/uniprot/Q9KQT7 Q9KQT7]
+
** [http://www.uniprot.org/uniprot/P27603 P27603]
−
** [http://www.uniprot.org/uniprot/Q9CFW9 Q9CFW9]
+
** [http://www.uniprot.org/uniprot/P32178 P32178]
−
** [http://www.uniprot.org/uniprot/P24220 P24220]
+
** [http://www.uniprot.org/uniprot/P43900 P43900]
−
** [http://www.uniprot.org/uniprot/P0A5M7 P0A5M7]
+
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
−
** [http://www.uniprot.org/uniprot/P43812 P43812]
+
** [http://www.uniprot.org/uniprot/P21204 P21204]
−
** [http://www.uniprot.org/uniprot/Q9PIC1 Q9PIC1]
+
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
−
** [http://www.uniprot.org/uniprot/P10652 P10652]
+
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
−
** [http://www.uniprot.org/uniprot/P07817 P07817]
+
** [http://www.uniprot.org/uniprot/P43902 P43902]
−
** [http://www.uniprot.org/uniprot/P03962 P03962]
+
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
−
** [http://www.uniprot.org/uniprot/P14017 P14017]
+
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
−
** [http://www.uniprot.org/uniprot/P07691 P07691]
+
** [http://www.uniprot.org/uniprot/P07023 P07023]
−
** [http://www.uniprot.org/uniprot/P08244 P08244]
+
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
−
** [http://www.uniprot.org/uniprot/P13439 P13439]
+
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
−
** [http://www.uniprot.org/uniprot/P05035 P05035]
+
** [http://www.uniprot.org/uniprot/P42738 P42738]
−
** [http://www.uniprot.org/uniprot/P09463 P09463]
+
** [http://www.uniprot.org/uniprot/O22409 O22409]
−
** [http://www.uniprot.org/uniprot/P14964 P14964]
+
** [http://www.uniprot.org/uniprot/O22410 O22410]
−
** [http://www.uniprot.org/uniprot/P21593 P21593]
 
−
** [http://www.uniprot.org/uniprot/P15188 P15188]
 
−
** [http://www.uniprot.org/uniprot/P07922 P07922]
 
−
** [http://www.uniprot.org/uniprot/P0A5M6 P0A5M6]
 
−
** [http://www.uniprot.org/uniprot/Q9JV18 Q9JV18]
 
−
** [http://www.uniprot.org/uniprot/P25971 P25971]
 
−
** [http://www.uniprot.org/uniprot/P46535 P46535]
 
−
** [http://www.uniprot.org/uniprot/P31754 P31754]
 
−
** [http://www.uniprot.org/uniprot/P32430 P32430]
 
−
** [http://www.uniprot.org/uniprot/Q01637 Q01637]
 
−
** [http://www.uniprot.org/uniprot/P09556 P09556]
 
−
** [http://www.uniprot.org/uniprot/P21594 P21594]
 
−
** [http://www.uniprot.org/uniprot/Q06375 Q06375]
 
−
** [http://www.uniprot.org/uniprot/P41769 P41769]
 
−
** [http://www.uniprot.org/uniprot/Q18516 Q18516]
 
−
** [http://www.uniprot.org/uniprot/Q59654 Q59654]
 
−
** [http://www.uniprot.org/uniprot/Q42586 Q42586]
 
−
** [http://www.uniprot.org/uniprot/P48844 P48844]
 
−
** [http://www.uniprot.org/uniprot/P43230 P43230]
 
−
** [http://www.uniprot.org/uniprot/Q42942 Q42942]
 
−
** [http://www.uniprot.org/uniprot/O74110 O74110]
 
 
</div>
 
</div>
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: common-name=orotidine-5'-phosphate decarboxylase}}
+
{{#set: common-name=chorismate mutase}}
−
{{#set: ec-number=ec-4.1.1.23}}
+
{{#set: ec-number=ec-5.4.99.5}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=7}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction CHORISMATEMUT-RXN

  • direction:
    • reversible
  • common-name:
    • chorismate mutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3461, L-tyrosine biosynthesis II:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120, L-tyrosine biosynthesis III:
    • 2 reactions found over 3 reactions in the full pathway
  • PHESYN, L-phenylalanine biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7626, bacilysin biosynthesis:
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-3462, L-phenylalanine biosynthesis II:
    • 2 reactions found over 3 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6627, salinosporamide A biosynthesis:
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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