Difference between revisions of "CIS-DELTA3-ENOYL-COA"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] == * direction: ** reversible * common-name:...")
(Created page with "Category:metabolite == Metabolite ADENOSYLCOBALAMIN == * common-name: ** adenosylcobalamin * smiles: ** cc%15(c=c%13(c(n%12(c%14(oc(co)c(op([o-])(=o)oc(c)cnc(=o)ccc1(c(cc(...")
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] ==
+
== Metabolite ADENOSYLCOBALAMIN ==
−
* direction:
 
−
** reversible
 
 
* common-name:
 
* common-name:
−
** 3-isopropylmalate dehydrogenase
+
** adenosylcobalamin
−
* synonymous:
+
* smiles:
−
** β-isopropylmalic enzyme
+
** cc%15(c=c%13(c(n%12(c%14(oc(co)c(op([o-])(=o)oc(c)cnc(=o)ccc1(c(cc(n)=o)c2(c4(c)(c(c)(cc(n)=o)c(ccc(=o)n)c3(c(c)=c6(c(cc(=o)n)(c(ccc(n)=o)c5(c=c8(c(c)(c)c(ccc(n)=o)c7(c(c)=c1n2[co---]([n+]=34)([n+]=56)([n+]=78)(cc9(c(c(o)c(o9)n%10(c=nc%11(c%10=nc=nc=%11n)))o))[n+](=c%12)%13))))c)))))(c))c(o)%14)))=cc(c)=%15))
−
** threo-ds-3-isopropylmalate dehydrogenase
+
* inchi-key:
−
== Reaction formula ==
+
** zihhmgtyzosfrc-yghjoqepsa-l
−
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-7100]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* molecular-weight:
−
== Gene(s) associated with this reaction  ==
+
** 1579.596
−
* Gene: [[SJ21291]]
+
== Reaction(s) known to consume the compound ==
−
** Category: [[annotation]]
+
* [[ExchangeSeed-ADENOSYLCOBALAMIN]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[TransportSeed-ADENOSYLCOBALAMIN]]
−
** Category: [[orthology]]
+
== Reaction(s) known to produce the compound ==
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[COBALADENOSYLTRANS-RXN]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[ExchangeSeed-ADENOSYLCOBALAMIN]]
−
== Pathway(s) ==
+
* [[TransportSeed-ADENOSYLCOBALAMIN]]
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
+
== Reaction(s) of unknown directionality ==
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: common-name=adenosylcobalamin}}
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
+
{{#set: inchi-key=inchikey=zihhmgtyzosfrc-yghjoqepsa-l}}
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
{{#set: molecular-weight=1579.596}}
−
== Reconstruction information  ==
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
== External links  ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10895 10895]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04426 R04426]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P05644 P05644]
 
−
** [http://www.uniprot.org/uniprot/P05645 P05645]
 
−
** [http://www.uniprot.org/uniprot/Q01987 Q01987]
 
−
** [http://www.uniprot.org/uniprot/Q00412 Q00412]
 
−
** [http://www.uniprot.org/uniprot/P08791 P08791]
 
−
** [http://www.uniprot.org/uniprot/P30125 P30125]
 
−
** [http://www.uniprot.org/uniprot/Q9PLW0 Q9PLW0]
 
−
** [http://www.uniprot.org/uniprot/O66607 O66607]
 
−
** [http://www.uniprot.org/uniprot/P12010 P12010]
 
−
** [http://www.uniprot.org/uniprot/P04173 P04173]
 
−
** [http://www.uniprot.org/uniprot/Q5SIY4 Q5SIY4]
 
−
** [http://www.uniprot.org/uniprot/P24098 P24098]
 
−
** [http://www.uniprot.org/uniprot/Q9JU79 Q9JU79]
 
−
** [http://www.uniprot.org/uniprot/P43860 P43860]
 
−
** [http://www.uniprot.org/uniprot/P41019 P41019]
 
−
** [http://www.uniprot.org/uniprot/P54354 P54354]
 
−
** [http://www.uniprot.org/uniprot/Q56268 Q56268]
 
−
** [http://www.uniprot.org/uniprot/P29102 P29102]
 
−
** [http://www.uniprot.org/uniprot/P37412 P37412]
 
−
** [http://www.uniprot.org/uniprot/P23390 P23390]
 
−
** [http://www.uniprot.org/uniprot/P29696 P29696]
 
−
** [http://www.uniprot.org/uniprot/P41766 P41766]
 
−
** [http://www.uniprot.org/uniprot/Q02143 Q02143]
 
−
** [http://www.uniprot.org/uniprot/P34733 P34733]
 
−
** [http://www.uniprot.org/uniprot/P50180 P50180]
 
−
** [http://www.uniprot.org/uniprot/Q12591 Q12591]
 
−
** [http://www.uniprot.org/uniprot/Q12590 Q12590]
 
−
** [http://www.uniprot.org/uniprot/Q12592 Q12592]
 
−
** [http://www.uniprot.org/uniprot/P07139 P07139]
 
−
** [http://www.uniprot.org/uniprot/P41926 P41926]
 
−
** [http://www.uniprot.org/uniprot/P48012 P48012]
 
−
** [http://www.uniprot.org/uniprot/P87256 P87256]
 
−
** [http://www.uniprot.org/uniprot/P87257 P87257]
 
−
** [http://www.uniprot.org/uniprot/P73960 P73960]
 
−
** [http://www.uniprot.org/uniprot/O86504 O86504]
 
−
** [http://www.uniprot.org/uniprot/O85837 O85837]
 
−
** [http://www.uniprot.org/uniprot/P18869 P18869]
 
−
** [http://www.uniprot.org/uniprot/P34738 P34738]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=3-isopropylmalate dehydrogenase}}
 
−
{{#set: synonymous=&beta;-isopropylmalic enzyme|threo-ds-3-isopropylmalate dehydrogenase}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
 

Revision as of 20:37, 18 December 2020

Metabolite ADENOSYLCOBALAMIN

  • common-name:
    • adenosylcobalamin
  • smiles:
    • cc%15(c=c%13(c(n%12(c%14(oc(co)c(op([o-])(=o)oc(c)cnc(=o)ccc1(c(cc(n)=o)c2(c4(c)(c(c)(cc(n)=o)c(ccc(=o)n)c3(c(c)=c6(c(cc(=o)n)(c(ccc(n)=o)c5(c=c8(c(c)(c)c(ccc(n)=o)c7(c(c)=c1n2[co---]([n+]=34)([n+]=56)([n+]=78)(cc9(c(c(o)c(o9)n%10(c=nc%11(c%10=nc=nc=%11n)))o))[n+](=c%12)%13))))c)))))(c))c(o)%14)))=cc(c)=%15))
  • inchi-key:
    • zihhmgtyzosfrc-yghjoqepsa-l
  • molecular-weight:
    • 1579.596

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CIS-DELTA3-ENOYL-COA&oldid=48415"