Difference between revisions of "CIT"

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(Created page with "Category:gene == Gene SJ00087 == * transcription-direction: ** negative * right-end-position: ** 526111 * left-end-position: ** 505527 * centisome-position: ** 45.164566...")
 
(Created page with "Category:metabolite == Metabolite CIT == * common-name: ** citrate * smiles: ** c(=o)([o-])cc(c(=o)[o-])(o)cc(=o)[o-] * inchi-key: ** krknybchxyngox-uhfffaoysa-k * molecul...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00087 ==
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== Metabolite CIT ==
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* transcription-direction:
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* common-name:
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** negative
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** citrate
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* right-end-position:
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* smiles:
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** 526111
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** c(=o)([o-])cc(c(=o)[o-])(o)cc(=o)[o-]
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* left-end-position:
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* inchi-key:
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** 505527
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** krknybchxyngox-uhfffaoysa-k
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* centisome-position:
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* molecular-weight:
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** 45.164566   
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** 189.101
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[ACONITATEDEHYDR-RXN]]
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== Reaction(s) associated ==
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* [[AKGCITtm]]
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* [[ATPASE-RXN]]
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* [[ATP-CITRATE-PRO-S--LYASE-RXN]]
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** Category: [[annotation]]
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* [[ATPCL]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[OAACITtm]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[RXN-14047]]
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** Category: [[annotation]]
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* [[biomass_rxn]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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* [[RXN-12195]]
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* [[ACONITATEDEHYDR-RXN]]
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** Category: [[annotation]]
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* [[AKGCITtm]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CITSYN-RXN]]
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* [[RXN-12196]]
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* [[CSm]]
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** Category: [[annotation]]
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* [[OAACITtm]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14047]]
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* [[RXN0-5462]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=citrate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=krknybchxyngox-uhfffaoysa-k}}
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== Pathway(s) associated ==
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{{#set: molecular-weight=189.101}}
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=526111}}
 
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{{#set: left-end-position=505527}}
 
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{{#set: centisome-position=45.164566    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CIT

  • common-name:
    • citrate
  • smiles:
    • c(=o)([o-])cc(c(=o)[o-])(o)cc(=o)[o-]
  • inchi-key:
    • krknybchxyngox-uhfffaoysa-k
  • molecular-weight:
    • 189.101

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CIT&oldid=136849"