Difference between revisions of "COPROPORPHYRIN III"

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(Created page with "Category:gene == Gene SJ15388 == * transcription-direction: ** positive * right-end-position: ** 482236 * left-end-position: ** 467092 * centisome-position: ** 66.27816...")
(Created page with "Category:metabolite == Metabolite COPROPORPHYRIN_III == * common-name: ** coproporphyrin iii * smiles: ** cc1(=c2(c=c5(c(c)=c(ccc([o-])=o)c(c=c4(c(ccc([o-])=o)=c(c)c(=cc3(...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ15388 ==
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== Metabolite COPROPORPHYRIN_III ==
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* transcription-direction:
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* common-name:
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** positive
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** coproporphyrin iii
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* right-end-position:
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* smiles:
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** 482236
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** cc1(=c2(c=c5(c(c)=c(ccc([o-])=o)c(c=c4(c(ccc([o-])=o)=c(c)c(=cc3(c(ccc(=o)[o-])=c(c)c(=cc(=c(ccc([o-])=o)1)n2)n=3))n4))=n5)))
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* left-end-position:
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* inchi-key:
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** 467092
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** jwfcywsmnrlxlx-ujjxfscmsa-j
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* centisome-position:
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* molecular-weight:
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** 66.27816   
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** 650.687
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-17518]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[TRIOSEPISOMERIZATION-RXN]]
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* [[RXN-17517]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=coproporphyrin iii}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=jwfcywsmnrlxlx-ujjxfscmsa-j}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=650.687}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[GLUCONEO-PWY]]
 
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** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[CALVIN-PWY]]
 
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** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[P185-PWY]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-5484]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-1042]]
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[P341-PWY]]
 
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** '''6''' reactions found over '''10''' reactions in the full pathway
 
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* [[GLYCOLYSIS]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[ANAGLYCOLYSIS-PWY]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY66-399]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-6142]]
 
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** '''10''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY66-373]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7003]]
 
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** '''8''' reactions found over '''6''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=482236}}
 
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{{#set: left-end-position=467092}}
 
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{{#set: centisome-position=66.27816    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=1}}
 
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{{#set: nb pathway associated=12}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite COPROPORPHYRIN_III

  • common-name:
    • coproporphyrin iii
  • smiles:
    • cc1(=c2(c=c5(c(c)=c(ccc([o-])=o)c(c=c4(c(ccc([o-])=o)=c(c)c(=cc3(c(ccc(=o)[o-])=c(c)c(=cc(=c(ccc([o-])=o)1)n2)n=3))n4))=n5)))
  • inchi-key:
    • jwfcywsmnrlxlx-ujjxfscmsa-j
  • molecular-weight:
    • 650.687

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=COPROPORPHYRIN_III&oldid=138461"