Difference between revisions of "CPD-10244"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** reversible * common-name: *...")
 
(Created page with "Category:metabolite == Metabolite CPD-10244 == * common-name: ** docosahexaenoate * smiles: ** ccc=ccc=ccc=ccc=ccc=ccc=cccc(=o)[o-] * inchi-key: ** mbmbgcfofbjsgt-kubavdmb...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
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== Metabolite CPD-10244 ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** sulfate adenylyltransferase
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** docosahexaenoate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
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** ccc=ccc=ccc=ccc=ccc=ccc=cccc(=o)[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
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** mbmbgcfofbjsgt-kubavdmbsa-m
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ09890]]
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** 327.486
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-16063]]
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** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-16017]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-16063]]
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* Gene: [[SJ04851]]
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* [[RXN-16138]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=docosahexaenoate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=mbmbgcfofbjsgt-kubavdmbsa-m}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=327.486}}
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== Pathway(s) ==
 
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* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6683]], assimilatory sulfate reduction III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[SULFMETII-PWY]], assimilatory sulfate reduction II: [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q12650 Q12650]
 
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** [http://www.uniprot.org/uniprot/O33581 O33581]
 
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** [http://www.uniprot.org/uniprot/O34764 O34764]
 
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** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 
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** [http://www.uniprot.org/uniprot/O67174 O67174]
 
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** [http://www.uniprot.org/uniprot/P21156 P21156]
 
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** [http://www.uniprot.org/uniprot/O23324 O23324]
 
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** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 
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** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 
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** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 
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** [http://www.uniprot.org/uniprot/P28604 P28604]
 
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** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 
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** [http://www.uniprot.org/uniprot/P23845 P23845]
 
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** [http://www.uniprot.org/uniprot/O43252 O43252]
 
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** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 
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** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 
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** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 
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** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
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** [http://www.uniprot.org/uniprot/P08536 P08536]
 
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** [http://www.uniprot.org/uniprot/P74241 P74241]
 
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** [http://www.uniprot.org/uniprot/O48888 O48888]
 
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** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
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** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
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** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
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** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
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** [http://www.uniprot.org/uniprot/P13441 P13441]
 
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** [http://www.uniprot.org/uniprot/P13442 P13442]
 
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</div>
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=sulfate adenylyltransferase}}
 
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{{#set: ec-number=ec-2.7.7.4}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite CPD-10244

  • common-name:
    • docosahexaenoate
  • smiles:
    • ccc=ccc=ccc=ccc=ccc=ccc=cccc(=o)[o-]
  • inchi-key:
    • mbmbgcfofbjsgt-kubavdmbsa-m
  • molecular-weight:
    • 327.486

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-10244&oldid=139546"