Difference between revisions of "CPD-10262"

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(Created page with "Category:gene == Gene SJ04760 == * transcription-direction: ** negative * right-end-position: ** 85279 * left-end-position: ** 34616 * centisome-position: ** 34.100063...")
(Created page with "Category:metabolite == Metabolite CPD-10262 == * common-name: ** trans-octadec-2-enoyl-coa * smiles: ** cccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ04760 ==
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== Metabolite CPD-10262 ==
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* transcription-direction:
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* common-name:
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** negative
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** trans-octadec-2-enoyl-coa
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* right-end-position:
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* smiles:
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** 85279
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** cccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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* left-end-position:
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* inchi-key:
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** 34616
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** nbccuihohukbmk-zddafbbhsa-j
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* centisome-position:
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* molecular-weight:
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** 34.100063   
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** 1027.953
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[ECOAH8h]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[ECOAH8]]
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** Category: [[annotation]]
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* [[ECOAH8h]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9545]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=trans-octadec-2-enoyl-coa}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=nbccuihohukbmk-zddafbbhsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1027.953}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=85279}}
 
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{{#set: left-end-position=34616}}
 
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{{#set: centisome-position=34.100063    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-10262

  • common-name:
    • trans-octadec-2-enoyl-coa
  • smiles:
    • cccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
  • inchi-key:
    • nbccuihohukbmk-zddafbbhsa-j
  • molecular-weight:
    • 1027.953

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-10262&oldid=138188"