Difference between revisions of "CPD-10576"

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(Created page with "Category:gene == Gene SJ14636 == * transcription-direction: ** positive * right-end-position: ** 61018 * left-end-position: ** 59423 * centisome-position: ** 19.087189...")
(Created page with "Category:metabolite == Metabolite COBINAMIDE == * common-name: ** cobinamide * smiles: ** cc(o)cnc(=o)ccc5(c)(c(cc(=o)n)[ch]7(c8(c)(c(c)(cc(n)=o)c(ccc(n)=o)c1(=[n+]([co---...")
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ14636 ==
+
== Metabolite COBINAMIDE ==
* transcription-direction:
+
* common-name:
** positive
+
** cobinamide
* right-end-position:
+
* smiles:
** 61018
+
** cc(o)cnc(=o)ccc5(c)(c(cc(=o)n)[ch]7(c8(c)(c(c)(cc(n)=o)c(ccc(n)=o)c1(=[n+]([co---]26([n+]4(c(=cc3(c(ccc(n)=o)c(c)(cc(n)=o)c(=c(c)1)[n+]2=3))c(c)(c)c(ccc(n)=o)c=4c(c)=c5n67)))8))))
* left-end-position:
+
* inchi-key:
** 59423
+
** xqrjfevdqxeiax-jfyqdrlcsa-m
* centisome-position:
+
* molecular-weight:
** 19.087189   
+
** 990.096
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[BTUR2-RXN]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=cobinamide}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=xqrjfevdqxeiax-jfyqdrlcsa-m}}
** Category: [[orthology]]
+
{{#set: molecular-weight=990.096}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-6907]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6908]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7356]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6898]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=61018}}
 
{{#set: left-end-position=59423}}
 
{{#set: centisome-position=19.087189    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=4}}
 

Revision as of 20:31, 18 December 2020

Metabolite COBINAMIDE

  • common-name:
    • cobinamide
  • smiles:
    • cc(o)cnc(=o)ccc5(c)(c(cc(=o)n)[ch]7(c8(c)(c(c)(cc(n)=o)c(ccc(n)=o)c1(=[n+]([co---]26([n+]4(c(=cc3(c(ccc(n)=o)c(c)(cc(n)=o)c(=c(c)1)[n+]2=3))c(c)(c)c(ccc(n)=o)c=4c(c)=c5n67)))8))))
  • inchi-key:
    • xqrjfevdqxeiax-jfyqdrlcsa-m
  • molecular-weight:
    • 990.096

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality