Difference between revisions of "CPD-10814"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7230 RXN0-7230] == * direction: ** left-to-right * common-name: ** choline dehydrogenase * ec-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4577/NADP/WATER.81. RXN-...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7230 RXN0-7230] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4577/NADP/WATER.81. RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4577/NADP/WATER.81.] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** choline dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.99.1 ec-1.1.99.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CHOLINE]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[ETR-Quinols]][c]
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* 1.0 [[44-DIMETHYL-824-CHOLESTADIENOL]][c] '''+''' 3.0 [[NADPH]][c] '''+''' 3.0 [[OXYGEN-MOLECULE]][c] '''+''' 2.0 [[PROTON]][c] '''=>''' 1.0 [[CPD-4577]][c] '''+''' 3.0 [[NADP]][c] '''+''' 4.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09287]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07158]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06047]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ12409]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ22552]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=choline dehydrogenase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-1.1.99.1}}
 
{{#set: nb gene associated=5}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 09:29, 27 August 2019