Difference between revisions of "CPD-1083"
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(Created page with "Category:gene == Gene SJ05824 == * transcription-direction: ** negative * right-end-position: ** 196004 * left-end-position: ** 186817 * centisome-position: ** 38.431328...") |
(Created page with "Category:gene == Gene SJ01054 == * transcription-direction: ** positive * right-end-position: ** 152338 * left-end-position: ** 141635 * centisome-position: ** 89.80325...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ01054 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 152338 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 141635 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 89.80325 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[PWY-6707]] |
| − | {{#set: left-end-position= | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[PWY-6163]] |
| + | ** '''6''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[QUINATEDEG-PWY]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6416]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=152338}} | ||
| + | {{#set: left-end-position=141635}} | ||
| + | {{#set: centisome-position=89.80325 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 09:28, 27 August 2019
Contents
Gene SJ01054
- transcription-direction:
- positive
- right-end-position:
- 152338
- left-end-position:
- 141635
- centisome-position:
- 89.80325
Organism(s) associated with this gene
Reaction(s) associated
- 3-DEHYDROQUINATE-DEHYDRATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6707
- 1 reactions found over 3 reactions in the full pathway
- PWY-6163
- 6 reactions found over 5 reactions in the full pathway
- QUINATEDEG-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-6416
- 1 reactions found over 3 reactions in the full pathway
