Difference between revisions of "CPD-11519"

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(Created page with "Category:gene == Gene SJ06814 == * transcription-direction: ** positive * right-end-position: ** 34550 * left-end-position: ** 28427 * centisome-position: ** 38.01621...")
(Created page with "Category:metabolite == Metabolite CPD-11519 == * common-name: ** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxyoctanoyl)-coa * smiles: ** ccc=ccc1(c(ccc(=o)1)cccccc(...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ06814 ==
+
== Metabolite CPD-11519 ==
* transcription-direction:
+
* common-name:
** positive
+
** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxyoctanoyl)-coa
* right-end-position:
+
* smiles:
** 34550
+
** ccc=ccc1(c(ccc(=o)1)cccccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
* left-end-position:
+
* inchi-key:
** 28427
+
** pddhcvxpabqiso-xjjfhseksa-j
* centisome-position:
+
* molecular-weight:
** 38.01621   
+
** 1055.92
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[RXN-10698]]
== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
* [[DCTP-PYROPHOSPHATASE-RXN]]
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* [[RXN-10697]]
** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxyoctanoyl)-coa}}
== Pathway(s) associated ==
+
{{#set: inchi-key=inchikey=pddhcvxpabqiso-xjjfhseksa-j}}
* [[PWY-7206]]
+
{{#set: molecular-weight=1055.92}}
** '''2''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=34550}}
 
{{#set: left-end-position=28427}}
 
{{#set: centisome-position=38.01621    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-11519

  • common-name:
    • 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxyoctanoyl)-coa
  • smiles:
    • ccc=ccc1(c(ccc(=o)1)cccccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
  • inchi-key:
    • pddhcvxpabqiso-xjjfhseksa-j
  • molecular-weight:
    • 1055.92

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality