Difference between revisions of "CPD-11521"

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(Created page with "Category:gene == Gene SJ00056 == * transcription-direction: ** negative * right-end-position: ** 956840 * left-end-position: ** 944169 * centisome-position: ** 64.2705...")
(Created page with "Category:metabolite == Metabolite CPD-11521 == * common-name: ** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-coa * smiles: ** ccc=ccc1(c(ccc(=o)1)cccccc(sccnc(=o)ccn...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ00056 ==
+
== Metabolite CPD-11521 ==
* transcription-direction:
+
* common-name:
** negative
+
** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-coa
* right-end-position:
+
* smiles:
** 956840
+
** ccc=ccc1(c(ccc(=o)1)cccccc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
* left-end-position:
+
* inchi-key:
** 944169
+
** vwfuyqvgvaevnh-wzglbkmisa-j
* centisome-position:
+
* molecular-weight:
** 64.2705   
+
** 1011.867
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[RXN-10706]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[RXN-15561]]
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* [[RXN-10699]]
** Category: [[annotation]]
+
== Reaction(s) of unknown directionality ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-coa}}
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
{{#set: inchi-key=inchikey=vwfuyqvgvaevnh-wzglbkmisa-j}}
** Category: [[annotation]]
+
{{#set: molecular-weight=1011.867}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7511]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=956840}}
 
{{#set: left-end-position=944169}}
 
{{#set: centisome-position=64.2705    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-11521

  • common-name:
    • 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-coa
  • smiles:
    • ccc=ccc1(c(ccc(=o)1)cccccc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
  • inchi-key:
    • vwfuyqvgvaevnh-wzglbkmisa-j
  • molecular-weight:
    • 1011.867

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality