Difference between revisions of "CPD-11524"

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(Created page with "Category:gene == Gene SJ03668 == * transcription-direction: ** negative * right-end-position: ** 491696 * left-end-position: ** 477233 * centisome-position: ** 91.47003...")
(Created page with "Category:gene == Gene SJ17646 == * transcription-direction: ** positive * right-end-position: ** 1045935 * left-end-position: ** 1029685 * centisome-position: ** 89.50778...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03668 ==
+
== Gene SJ17646 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 491696
+
** 1045935
 
* left-end-position:
 
* left-end-position:
−
** 477233
+
** 1029685
 
* centisome-position:
 
* centisome-position:
−
** 91.47003    
+
** 89.50778    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYOHMETRANS-RXN]]
+
* [[PEROXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5234]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[1CMET2-PWY]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-5497]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
* [[PWY-5466]]
−
* [[PWY-181]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6824]]
−
* [[PWY-3661]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-5469]]
−
* [[PWY-2201]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-5461]]
−
* [[GLYSYN-PWY]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-3661-1]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=1045935}}
−
* [[PWY-1622]]
+
{{#set: left-end-position=1029685}}
−
** '''6''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=89.50778   }}
−
* [[PWY-3841]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-2161]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=491696}}
 
−
{{#set: left-end-position=477233}}
 
−
{{#set: centisome-position=91.47003   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=6}}

Revision as of 09:27, 27 August 2019

Gene SJ17646

  • transcription-direction:
    • positive
  • right-end-position:
    • 1045935
  • left-end-position:
    • 1029685
  • centisome-position:
    • 89.50778

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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