Difference between revisions of "CPD-11525"

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(Created page with "Category:gene == Gene SJ20712 == * transcription-direction: ** negative * right-end-position: ** 86062 * left-end-position: ** 67008 * centisome-position: ** 32.776527...")
(Created page with "Category:metabolite == Metabolite CPD-17365 == * common-name: ** (4z,7z,10z,13z,16z)-docosapentaenoyl-coa * smiles: ** cccccc=ccc=ccc=ccc=ccc=cccc(=o)sccnc(=o)ccnc(=o)c(o)...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ20712 ==
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== Metabolite CPD-17365 ==
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* transcription-direction:
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* common-name:
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** negative
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** (4z,7z,10z,13z,16z)-docosapentaenoyl-coa
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* right-end-position:
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* smiles:
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** 86062
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** cccccc=ccc=ccc=ccc=ccc=cccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 67008
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** qkbtyzdpvnterq-uwvcyphhsa-j
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* centisome-position:
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* molecular-weight:
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** 32.776527   
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** 1075.997
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17116]]
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* [[GPPSYN-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(4z,7z,10z,13z,16z)-docosapentaenoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=qkbtyzdpvnterq-uwvcyphhsa-j}}
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* [[RXN-8999]]
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{{#set: molecular-weight=1075.997}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-6383]]
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7410]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7102]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6859]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7736]]
 
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5122]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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* [[PWY-7141]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7659]]
 
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** '''1''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7709]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5123]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7182]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5785]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=86062}}
 
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{{#set: left-end-position=67008}}
 
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{{#set: centisome-position=32.776527    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=12}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD-17365

  • common-name:
    • (4z,7z,10z,13z,16z)-docosapentaenoyl-coa
  • smiles:
    • cccccc=ccc=ccc=ccc=ccc=cccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • qkbtyzdpvnterq-uwvcyphhsa-j
  • molecular-weight:
    • 1075.997

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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