Difference between revisions of "CPD-11855"

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(Created page with "Category:gene == Gene SJ02700 == * transcription-direction: ** positive * right-end-position: ** 70526 * left-end-position: ** 61508 * centisome-position: ** 47.298203...")
(Created page with "Category:metabolite == Metabolite CPD-11855 == * common-name: ** (r)-4-hydroxy-4-methyl-2-oxoglutarate * smiles: ** cc(o)(cc(c(=o)[o-])=o)c([o-])=o * inchi-key: ** yrwamsx...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ02700 ==
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== Metabolite CPD-11855 ==
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* transcription-direction:
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* common-name:
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** positive
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** (r)-4-hydroxy-4-methyl-2-oxoglutarate
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* right-end-position:
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* smiles:
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** 70526
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** cc(o)(cc(c(=o)[o-])=o)c([o-])=o
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* left-end-position:
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* inchi-key:
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** 61508
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** yrwamsxhybbhfl-zcfiwibfsa-l
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* centisome-position:
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* molecular-weight:
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** 47.298203   
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** 174.11
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-12074]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[PEROXID-RXN]]
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* [[RXN-12074]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=(r)-4-hydroxy-4-methyl-2-oxoglutarate}}
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* [[RXN-14240]]
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{{#set: inchi-key=inchikey=yrwamsxhybbhfl-zcfiwibfsa-l}}
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** Category: [[annotation]]
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{{#set: molecular-weight=174.11}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-15288]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17352]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-8635]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7214]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7445]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5466]]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-6824]]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-5469]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5461]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=70526}}
 
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{{#set: left-end-position=61508}}
 
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{{#set: centisome-position=47.298203    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=6}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-11855

  • common-name:
    • (r)-4-hydroxy-4-methyl-2-oxoglutarate
  • smiles:
    • cc(o)(cc(c(=o)[o-])=o)c([o-])=o
  • inchi-key:
    • yrwamsxhybbhfl-zcfiwibfsa-l
  • molecular-weight:
    • 174.11

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-11855&oldid=137135"