Difference between revisions of "CPD-12117"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-CPD-3 ExchangeSeed-CPD-3] == * direction: ** reversible == Reaction formula == * 1.0 [...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] == * direction: ** left-to-right * common-name: ** methionine ad...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-CPD-3 ExchangeSeed-CPD-3] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** methionine adenosyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.6 ec-2.5.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD-3]][C-BOUNDARY] '''<=>''' 1.0 [[CPD-3]][e]
+
* 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ07891]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SAM-PWY SAM-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5912 PWY-5912]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[unknown-tool]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: nb gene associated=0}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21081 21081]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction tool=unknown-tool}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
* UNIPROT:
−
{{#set: reconstruction source=import_from_medium}}
+
** [http://www.uniprot.org/uniprot/P19358 P19358]
 +
** [http://www.uniprot.org/uniprot/P18298 P18298]
 +
** [http://www.uniprot.org/uniprot/Q91X83 Q91X83]
 +
** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8]
 +
** [http://www.uniprot.org/uniprot/P54419 P54419]
 +
** [http://www.uniprot.org/uniprot/P56460 P56460]
 +
** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6]
 +
** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0]
 +
** [http://www.uniprot.org/uniprot/O50163 O50163]
 +
** [http://www.uniprot.org/uniprot/P43762 P43762]
 +
** [http://www.uniprot.org/uniprot/P23686 P23686]
 +
** [http://www.uniprot.org/uniprot/P17562 P17562]
 +
** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8]
 +
** [http://www.uniprot.org/uniprot/Q9S992 Q9S992]
 +
** [http://www.uniprot.org/uniprot/Q90862 Q90862]
 +
** [http://www.uniprot.org/uniprot/P13444 P13444]
 +
** [http://www.uniprot.org/uniprot/P31153 P31153]
 +
** [http://www.uniprot.org/uniprot/Q00266 Q00266]
 +
** [http://www.uniprot.org/uniprot/P43281 P43281]
 +
** [http://www.uniprot.org/uniprot/P40320 P40320]
 +
** [http://www.uniprot.org/uniprot/P43280 P43280]
 +
** [http://www.uniprot.org/uniprot/P43282 P43282]
 +
** [http://www.uniprot.org/uniprot/P48498 P48498]
 +
** [http://www.uniprot.org/uniprot/P10659 P10659]
 +
** [http://www.uniprot.org/uniprot/Q39465 Q39465]
 +
** [http://www.uniprot.org/uniprot/P48466 P48466]
 +
** [http://www.uniprot.org/uniprot/P49612 P49612]
 +
** [http://www.uniprot.org/uniprot/P49613 P49613]
 +
** [http://www.uniprot.org/uniprot/P78003 P78003]
 +
** [http://www.uniprot.org/uniprot/Q49070 Q49070]
 +
** [http://www.uniprot.org/uniprot/P0A817 P0A817]
 +
** [http://www.uniprot.org/uniprot/P50299 P50299]
 +
** [http://www.uniprot.org/uniprot/O22350 O22350]
 +
** [http://www.uniprot.org/uniprot/P24260 P24260]
 +
** [http://www.uniprot.org/uniprot/O60198 O60198]
 +
** [http://www.uniprot.org/uniprot/Q12642 Q12642]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=methionine adenosyltransferase}}
 +
{{#set: ec-number=ec-2.5.1.6}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction S-ADENMETSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • methionine adenosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ETHYL-PWY, ethylene biosynthesis I (plants): ETHYL-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • METHIONINE-DEG1-PWY, L-methionine degradation I (to L-homocysteine): METHIONINE-DEG1-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • SAM-PWY, S-adenosyl-L-methionine biosynthesis: SAM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5912, 2'-deoxymugineic acid phytosiderophore biosynthesis: PWY-5912
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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