Difference between revisions of "CPD-12130"

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(Created page with "Category:gene == Gene SJ21660 == * transcription-direction: ** positive * right-end-position: ** 227030 * left-end-position: ** 213067 * centisome-position: ** 18.835367...")
 
(Created page with "Category:metabolite == Metabolite CPD-12130 == * common-name: ** menaquinol-13 * smiles: ** cc(=cccc(=cccc(=cccc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccc...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21660 ==
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== Metabolite CPD-12130 ==
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* transcription-direction:
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* common-name:
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** positive
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** menaquinol-13
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* right-end-position:
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* smiles:
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** 227030
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** cc(=cccc(=cccc(=cccc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccc1(c(c)=c(o)c2(c=cc=cc(c(o)=1)=2)))c)c)c)c)c
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* left-end-position:
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* inchi-key:
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** 213067
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** zlhyydgaqjjtjl-hwrcdasfsa-n
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* centisome-position:
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* molecular-weight:
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** 18.835367   
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** 1059.735
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-9366]]
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* [[AICARTRANSFORM-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=menaquinol-13}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=zlhyydgaqjjtjl-hwrcdasfsa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1059.735}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[FPAIF]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* [[IMPCYCLOHYDROLASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-6123]]
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6124]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7234]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=227030}}
 
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{{#set: left-end-position=213067}}
 
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{{#set: centisome-position=18.835367    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=3}}
 

Latest revision as of 11:10, 18 March 2021

Metabolite CPD-12130

  • common-name:
    • menaquinol-13
  • smiles:
    • cc(=cccc(=cccc(=cccc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccc1(c(c)=c(o)c2(c=cc=cc(c(o)=1)=2)))c)c)c)c)c
  • inchi-key:
    • zlhyydgaqjjtjl-hwrcdasfsa-n
  • molecular-weight:
    • 1059.735

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-12130&oldid=136604"