Difference between revisions of "CPD-12199"

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(Created page with "Category:gene == Gene SJ05532 == * transcription-direction: ** negative * right-end-position: ** 65096 * left-end-position: ** 49275 * centisome-position: ** 54.585033...")
 
(Created page with "Category:metabolite == Metabolite CPD-12199 == * common-name: ** 3s-(4-hydroxyphenyl)-3-hydroxy-propanoyl-coa * smiles: ** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)cc(o)c1(=cc=c(o)...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ05532 ==
+
== Metabolite CPD-12199 ==
* transcription-direction:
+
* common-name:
** negative
+
** 3s-(4-hydroxyphenyl)-3-hydroxy-propanoyl-coa
* right-end-position:
+
* smiles:
** 65096
+
** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)cc(o)c1(=cc=c(o)c=c1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
* left-end-position:
+
* inchi-key:
** 49275
+
** vddfxumtxcqmfm-ugdqnksbsa-j
* centisome-position:
+
* molecular-weight:
** 54.585033   
+
** 927.663
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-11245]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-11244]]
* [[3.2.1.21-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=3s-(4-hydroxyphenyl)-3-hydroxy-propanoyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=vddfxumtxcqmfm-ugdqnksbsa-j}}
* [[3.2.1.39-RXN]]
+
{{#set: molecular-weight=927.663}}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10769]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10773]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13602]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13603]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14179]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-5341]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8036]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-9674]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWY-6788]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7091]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7092]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-3121]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5176]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6002]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=65096}}
 
{{#set: left-end-position=49275}}
 
{{#set: centisome-position=54.585033    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=10}}
 
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-12199

  • common-name:
    • 3s-(4-hydroxyphenyl)-3-hydroxy-propanoyl-coa
  • smiles:
    • cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)cc(o)c1(=cc=c(o)c=c1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
  • inchi-key:
    • vddfxumtxcqmfm-ugdqnksbsa-j
  • molecular-weight:
    • 927.663

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality