Difference between revisions of "CPD-12581"

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(Created page with "Category:gene == Gene SJ18981 == * transcription-direction: ** positive * right-end-position: ** 212420 * left-end-position: ** 210462 * centisome-position: ** 90.223656...")
 
(Created page with "Category:metabolite == Metabolite CPD-12581 == * common-name: ** s-(2e,6e)-farnesyl-l-cysteine * smiles: ** cc(c)=cccc(c)=cccc(c)=ccscc([n+])c(=o)[o-] * inchi-key: ** sysl...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ18981 ==
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== Metabolite CPD-12581 ==
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* transcription-direction:
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* common-name:
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** positive
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** s-(2e,6e)-farnesyl-l-cysteine
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* right-end-position:
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* smiles:
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** 212420
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** cc(c)=cccc(c)=cccc(c)=ccscc([n+])c(=o)[o-]
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* left-end-position:
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* inchi-key:
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** 210462
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** syslnqmklrogcl-bcyuyympsa-n
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* centisome-position:
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* molecular-weight:
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** 90.223656   
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** 325.508
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-11623]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=s-(2e,6e)-farnesyl-l-cysteine}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=syslnqmklrogcl-bcyuyympsa-n}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=325.508}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=212420}}
 
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{{#set: left-end-position=210462}}
 
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{{#set: centisome-position=90.223656    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-12581

  • common-name:
    • s-(2e,6e)-farnesyl-l-cysteine
  • smiles:
    • cc(c)=cccc(c)=cccc(c)=ccscc([n+])c(=o)[o-]
  • inchi-key:
    • syslnqmklrogcl-bcyuyympsa-n
  • molecular-weight:
    • 325.508

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-12581&oldid=136795"