Difference between revisions of "CPD-12692"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] == * direction: ** left-to-right * common-name: ** for...")
(Created page with "Category:metabolite == Metabolite CPD-61 == * common-name: ** (2r,3s)-2,3-dimethylmalate * smiles: ** cc(c(=o)[o-])c(c)(o)c(=o)[o-] * inchi-key: ** wtiiulqjlzehgz-cvyqjglw...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] ==
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== Metabolite CPD-61 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** formyltetrahydrofolate deformylase
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** (2r,3s)-2,3-dimethylmalate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/3.5.1.10 ec-3.5.1.10]
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** cc(c(=o)[o-])c(c)(o)c(=o)[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
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** wtiiulqjlzehgz-cvyqjglwsa-l
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ15379]]
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** 160.126
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[23-DIMETHYLMALATE-LYASE-RXN]]
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== Pathway(s) ==
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== Reaction(s) known to produce the compound ==
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* [[PWY-7909]], formaldehyde oxidation VII (THF pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7909 PWY-7909]
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== Reaction(s) of unknown directionality ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: common-name=(2r,3s)-2,3-dimethylmalate}}
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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{{#set: inchi-key=inchikey=wtiiulqjlzehgz-cvyqjglwsa-l}}
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** '''6''' reactions found over '''17''' reactions in the full pathway
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{{#set: molecular-weight=160.126}}
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 
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** '''10''' reactions found over '''24''' reactions in the full pathway
 
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 
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** '''9''' reactions found over '''12''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P37051 P37051]
 
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** [http://www.uniprot.org/uniprot/Q03432 Q03432]
 
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** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
 
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** [http://www.uniprot.org/uniprot/Q46339 Q46339]
 
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** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=formyltetrahydrofolate deformylase}}
 
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{{#set: ec-number=ec-3.5.1.10}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:35, 18 December 2020

Metabolite CPD-61

  • common-name:
    • (2r,3s)-2,3-dimethylmalate
  • smiles:
    • cc(c(=o)[o-])c(c)(o)c(=o)[o-]
  • inchi-key:
    • wtiiulqjlzehgz-cvyqjglwsa-l
  • molecular-weight:
    • 160.126

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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