Difference between revisions of "CPD-12826"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14520 RXN-14520] == * direction: ** left-to-right * common-name: ** 7-(3-amino-3-methylcarboxyp...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** left-to-right * common-name: ** trna-splicing endonuc...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** trna-splicing endonuclease subunit sen2 |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.6.1.16 ec-4.6.1.16] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ20336]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ00058]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-7803]], tRNA splicing II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7803 PWY-7803] |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY-6689]], tRNA splicing I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * | + | * UNIPROT: |
| − | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/O07118 O07118] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=trna-splicing endonuclease subunit sen2}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.6.1.16}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 09:29, 27 August 2019
Contents
Reaction 3.1.27.9-RXN
- direction:
- left-to-right
- common-name:
- trna-splicing endonuclease subunit sen2
- ec-number:
Reaction formula
- 1 CPD0-2350[c] => 1 Pre-tRNA-3-prime-half-molecules[c] + 1 Pre-tRNA-5-prime-half-molecules[c] + 1 tRNA-Introns[c]
Gene(s) associated with this reaction
- Gene: SJ20336
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00058
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7803, tRNA splicing II: PWY-7803
- 1 reactions found over 2 reactions in the full pathway
- PWY-6689, tRNA splicing I: PWY-6689
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- UNIPROT:
