Difference between revisions of "CPD-12897"

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(Created page with "Category:gene == Gene SJ00779 == * transcription-direction: ** negative * right-end-position: ** 150411 * left-end-position: ** 138794 * centisome-position: ** 85.85656...")
 
(Created page with "Category:metabolite == Metabolite CPD-12897 == * common-name: ** 7-methyl-3-oxooct-6-enoyl-coa * smiles: ** cc(c)=cccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00779 ==
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== Metabolite CPD-12897 ==
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* transcription-direction:
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* common-name:
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** negative
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** 7-methyl-3-oxooct-6-enoyl-coa
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* right-end-position:
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* smiles:
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** 150411
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** cc(c)=cccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 138794
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** lpmixvanmseery-fueukbnzsa-j
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* centisome-position:
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* molecular-weight:
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** 85.85656   
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** 915.695
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-11917]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[1.11.1.15-RXN]]
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{{#set: common-name=7-methyl-3-oxooct-6-enoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=lpmixvanmseery-fueukbnzsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=915.695}}
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* [[PEROXID-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14240]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-15288]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17352]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-8635]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5468]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7214]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7445]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5466]]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-6824]]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-5469]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5461]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=150411}}
 
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{{#set: left-end-position=138794}}
 
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{{#set: centisome-position=85.85656    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=7}}
 
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{{#set: nb pathway associated=6}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-12897

  • common-name:
    • 7-methyl-3-oxooct-6-enoyl-coa
  • smiles:
    • cc(c)=cccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • lpmixvanmseery-fueukbnzsa-j
  • molecular-weight:
    • 915.695

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-12897&oldid=137227"