Difference between revisions of "CPD-12904"

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(Created page with "Category:gene == Gene SJ11593 == * transcription-direction: ** negative * right-end-position: ** 221202 * left-end-position: ** 203484 * centisome-position: ** 54.982746...")
(Created page with "Category:metabolite == Metabolite CPD-12904 == * common-name: ** (2e)-5-methylhexa-2,4-dienoyl-coa * smiles: ** cc(c)=cc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(o...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ11593 ==
+
== Metabolite CPD-12904 ==
* transcription-direction:
+
* common-name:
** negative
+
** (2e)-5-methylhexa-2,4-dienoyl-coa
* right-end-position:
+
* smiles:
** 221202
+
** cc(c)=cc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
* left-end-position:
+
* inchi-key:
** 203484
+
** ifmyvrqehqtins-meoyllpmsa-j
* centisome-position:
+
* molecular-weight:
** 54.982746   
+
** 871.642
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-11919]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=(2e)-5-methylhexa-2,4-dienoyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=ifmyvrqehqtins-meoyllpmsa-j}}
** Category: [[orthology]]
+
{{#set: molecular-weight=871.642}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7391]]
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7524]]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-922]]
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6174]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY66-367]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7571]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=221202}}
 
{{#set: left-end-position=203484}}
 
{{#set: centisome-position=54.982746    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-12904

  • common-name:
    • (2e)-5-methylhexa-2,4-dienoyl-coa
  • smiles:
    • cc(c)=cc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • ifmyvrqehqtins-meoyllpmsa-j
  • molecular-weight:
    • 871.642

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality