Difference between revisions of "CPD-13080"

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(Created page with "Category:gene == Gene SJ16737 == * transcription-direction: ** negative * right-end-position: ** 66307 * left-end-position: ** 56088 * centisome-position: ** 8.223529...")
(Created page with "Category:metabolite == Metabolite CPD-13080 == * common-name: ** solasodine * smiles: ** cc1(cnc2(cc1)(c(c)c3([ch](o2)cc4(c(c)3cc[ch]5([ch]4cc=c6(c(c)5ccc(o)c6)))))) * inc...")
 
(7 intermediate revisions by 2 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ16737 ==
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== Metabolite CPD-13080 ==
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* transcription-direction:
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* common-name:
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** negative
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** solasodine
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* right-end-position:
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* smiles:
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** 66307
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** cc1(cnc2(cc1)(c(c)c3([ch](o2)cc4(c(c)3cc[ch]5([ch]4cc=c6(c(c)5ccc(o)c6))))))
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* left-end-position:
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* inchi-key:
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** 56088
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** kwvisvamqjwjsz-rqommasjsa-n
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* centisome-position:
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* molecular-weight:
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** 8.223529   
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** 413.642
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-12123]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[3.6.3.1-RXN]]
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{{#set: common-name=solasodine}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=kwvisvamqjwjsz-rqommasjsa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=413.642}}
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* [[3.6.3.44-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[ATPASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[TRANS-RXN-311]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=66307}}
 
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{{#set: left-end-position=56088}}
 
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{{#set: centisome-position=8.223529    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=8}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-13080

  • common-name:
    • solasodine
  • smiles:
    • cc1(cnc2(cc1)(c(c)c3([ch](o2)cc4(c(c)3cc[ch]5([ch]4cc=c6(c(c)5ccc(o)c6))))))
  • inchi-key:
    • kwvisvamqjwjsz-rqommasjsa-n
  • molecular-weight:
    • 413.642

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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