Difference between revisions of "CPD-13375"

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(Created page with "Category:gene == Gene SJ04408 == * transcription-direction: ** positive * right-end-position: ** 21914 * left-end-position: ** 2094 * centisome-position: ** 1.9455181...")
(Created page with "Category:metabolite == Metabolite CPD-13375 == * common-name: ** xxxg xyloglucan oligosaccharide * smiles: ** c1(c(c(c(c(o1)occ2(oc(c(o)c(o)c(o)2)oc4(c(o)c(o)c(oc(coc3(c(c...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ04408 ==
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== Metabolite CPD-13375 ==
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* transcription-direction:
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* common-name:
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** positive
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** xxxg xyloglucan oligosaccharide
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* right-end-position:
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* smiles:
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** 21914
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** c1(c(c(c(c(o1)occ2(oc(c(o)c(o)c(o)2)oc4(c(o)c(o)c(oc(coc3(c(c(c(co3)o)o)o))4)oc6(c(o)c(o)c(oc(coc5(c(c(c(co5)o)o)o))6)oc7(c(o)c(o)c(o)oc(co)7)))))o)o)o)
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* left-end-position:
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* inchi-key:
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** 2094
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** pzupagrihcrvkn-sphbqonksa-n
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* centisome-position:
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* molecular-weight:
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** 1.9455181   
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** 1062.931
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-12398]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-12399]]
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* [[3.1.1.64-RXN]]
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* [[RXN-12400]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=xxxg xyloglucan oligosaccharide}}
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* [[CARBOXYLESTERASE-RXN]]
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{{#set: inchi-key=inchikey=pzupagrihcrvkn-sphbqonksa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1062.931}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[LYSOPHOSPHOLIPASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10711]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10767]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12252]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12575]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-15035]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXNQT-4366]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6303]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6857]]
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7409]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=21914}}
 
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{{#set: left-end-position=2094}}
 
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{{#set: centisome-position=1.9455181    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=10}}
 
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{{#set: nb pathway associated=3}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-13375

  • common-name:
    • xxxg xyloglucan oligosaccharide
  • smiles:
    • c1(c(c(c(c(o1)occ2(oc(c(o)c(o)c(o)2)oc4(c(o)c(o)c(oc(coc3(c(c(c(co3)o)o)o))4)oc6(c(o)c(o)c(oc(coc5(c(c(c(co5)o)o)o))6)oc7(c(o)c(o)c(o)oc(co)7)))))o)o)o)
  • inchi-key:
    • pzupagrihcrvkn-sphbqonksa-n
  • molecular-weight:
    • 1062.931

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-13375&oldid=136745"