Difference between revisions of "CPD-13533"

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(Created page with "Category:gene == Gene SJ06602 == * transcription-direction: ** positive * right-end-position: ** 204909 * left-end-position: ** 196583 * centisome-position: ** 41.61852...")
(Created page with "Category:metabolite == Metabolite CPD-13533 == * common-name: ** (3r)-3-hydroxypentanoyl-coa * smiles: ** ccc(cc(sccnc(ccnc(c(c(cop(=o)([o-])op(occ1(oc(c(c1op([o-])([o-])=...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ06602 ==
+
== Metabolite CPD-13533 ==
* transcription-direction:
+
* common-name:
** positive
+
** (3r)-3-hydroxypentanoyl-coa
* right-end-position:
+
* smiles:
** 204909
+
** ccc(cc(sccnc(ccnc(c(c(cop(=o)([o-])op(occ1(oc(c(c1op([o-])([o-])=o)o)n3(c=nc2(c(=nc=nc=23)n))))([o-])=o)(c)c)o)=o)=o)=o)o
* left-end-position:
+
* inchi-key:
** 196583
+
** yygypcrwzmlsgk-orumcernsa-j
* centisome-position:
+
* molecular-weight:
** 41.61852   
+
** 863.619
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-12560]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[RXN-15561]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=(3r)-3-hydroxypentanoyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=yygypcrwzmlsgk-orumcernsa-j}}
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
{{#set: molecular-weight=863.619}}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7511]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=204909}}
 
{{#set: left-end-position=196583}}
 
{{#set: centisome-position=41.61852    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-13533

  • common-name:
    • (3r)-3-hydroxypentanoyl-coa
  • smiles:
    • ccc(cc(sccnc(ccnc(c(c(cop(=o)([o-])op(occ1(oc(c(c1op([o-])([o-])=o)o)n3(c=nc2(c(=nc=nc=23)n))))([o-])=o)(c)c)o)=o)=o)=o)o
  • inchi-key:
    • yygypcrwzmlsgk-orumcernsa-j
  • molecular-weight:
    • 863.619

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality