Difference between revisions of "CPD-13610"

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(Created page with "Category:gene == Gene SJ20236 == * transcription-direction: ** positive * right-end-position: ** 180986 * left-end-position: ** 163875 * centisome-position: ** 77.79049...")
(Created page with "Category:metabolite == Metabolite CPD-13610 == * common-name: ** 3-dehydrosphinganine (c20) * smiles: ** cccccccccccccccccc(=o)c([n+])co * inchi-key: ** fvolnxkbislpqy-ibg...")
 
(7 intermediate revisions by 2 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ20236 ==
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== Metabolite CPD-13610 ==
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* transcription-direction:
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* common-name:
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** positive
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** 3-dehydrosphinganine (c20)
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* right-end-position:
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* smiles:
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** 180986
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** cccccccccccccccccc(=o)c([n+])co
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* left-end-position:
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* inchi-key:
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** 163875
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** fvolnxkbislpqy-ibgzpjmesa-o
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* centisome-position:
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* molecular-weight:
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** 77.79049   
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** 328.557
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-12642]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[RXN-12642]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-dehydrosphinganine (c20)}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=fvolnxkbislpqy-ibgzpjmesa-o}}
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** Category: [[annotation]]
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{{#set: molecular-weight=328.557}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=180986}}
 
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{{#set: left-end-position=163875}}
 
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{{#set: centisome-position=77.79049    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-13610

  • common-name:
    • 3-dehydrosphinganine (c20)
  • smiles:
    • cccccccccccccccccc(=o)c([n+])co
  • inchi-key:
    • fvolnxkbislpqy-ibgzpjmesa-o
  • molecular-weight:
    • 328.557

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-13610&oldid=137299"