Difference between revisions of "CPD-13612"
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(Created page with "Category:gene == Gene SJ00075 == * transcription-direction: ** positive * right-end-position: ** 117186 * left-end-position: ** 90732 * centisome-position: ** 6.176215...") |
(Created page with "Category:gene == Gene SJ06815 == * transcription-direction: ** negative * right-end-position: ** 50302 * left-end-position: ** 36386 * centisome-position: ** 48.66 ==...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ06815 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 50302 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 36386 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 48.66 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[ALANINE-AMINOTRANSFERASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-13698]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[ALANINE-SYN2-PWY]] |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * [[PWY | + | * [[ALANINE-DEG3-PWY]] |
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[ALACAT2-PWY]] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-7117]] |
| − | ** ''' | + | ** '''10''' reactions found over '''12''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7115]] |
| − | ** ''' | + | ** '''9''' reactions found over '''10''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7383]] |
| − | {{#set: right-end-position= | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=50302}} |
| + | {{#set: left-end-position=36386}} | ||
| + | {{#set: centisome-position=48.66 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 14:23, 26 August 2019
Contents
Gene SJ06815
- transcription-direction:
- negative
- right-end-position:
- 50302
- left-end-position:
- 36386
- centisome-position:
- 48.66
Organism(s) associated with this gene
Reaction(s) associated
- ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ALANINE-AMINOTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13698
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- ALANINE-SYN2-PWY
- 1 reactions found over 1 reactions in the full pathway
- ALANINE-DEG3-PWY
- 1 reactions found over 1 reactions in the full pathway
- ALACAT2-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-7117
- 10 reactions found over 12 reactions in the full pathway
- PWY-7115
- 9 reactions found over 10 reactions in the full pathway
- PWY-7383
- 4 reactions found over 7 reactions in the full pathway
