Difference between revisions of "CPD-13713"

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(Created page with "Category:gene == Gene SJ06461 == * transcription-direction: ** positive * right-end-position: ** 315378 * left-end-position: ** 309266 * centisome-position: ** 65.039215...")
(Created page with "Category:metabolite == Metabolite CPD-13713 == * common-name: ** adenosine 5'-phosphoselenate * smiles: ** c(c3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))op(=o)([o-])o[se](...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ06461 ==
+
== Metabolite CPD-13713 ==
* transcription-direction:
+
* common-name:
** positive
+
** adenosine 5'-phosphoselenate
* right-end-position:
+
* smiles:
** 315378
+
** c(c3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))op(=o)([o-])o[se](=o)(=o)o
* left-end-position:
+
* inchi-key:
** 309266
+
** xcadvmzzfpierr-kqynxxcusa-m
* centisome-position:
+
* molecular-weight:
** 65.039215   
+
** 473.174
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
== Reaction(s) known to produce the compound ==
== Reaction(s) associated ==
+
* [[RXN-12720]]
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
== Reaction(s) of unknown directionality ==
* [[3.1.1.64-RXN]]
+
{{#set: common-name=adenosine 5'-phosphoselenate}}
** Category: [[annotation]]
+
{{#set: inchi-key=inchikey=xcadvmzzfpierr-kqynxxcusa-m}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: molecular-weight=473.174}}
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[LYSOPHOSPHOLIPASE-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[PHOSPHOLIPASE-A2-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10711]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12086]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12579]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15035]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-15065]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15067]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15068]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16138]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16139]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17735]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17736]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-6725]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[PWY-6803]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[LIPASYN-PWY]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7409]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7416]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7417]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY66-397]]
 
** '''1''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY66-395]]
 
** '''1''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY66-394]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7783]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[LIPAS-PWY]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=315378}}
 
{{#set: left-end-position=309266}}
 
{{#set: centisome-position=65.039215    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=22}}
 
{{#set: nb pathway associated=12}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-13713

  • common-name:
    • adenosine 5'-phosphoselenate
  • smiles:
    • c(c3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))op(=o)([o-])o[se](=o)(=o)o
  • inchi-key:
    • xcadvmzzfpierr-kqynxxcusa-m
  • molecular-weight:
    • 473.174

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality