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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] == | + | == Metabolite 1-4-D-xylooligosaccharides == |
| − | * direction:
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| − | ** reversible
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| | * common-name: | | * common-name: |
| − | ** galactokinase | + | ** a (1->4)-β-d-xylan oligosaccharide |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
| + | == Reaction(s) known to produce the compound == |
| − | == Reaction formula ==
| + | * [[3.2.1.8-RXN]] |
| − | * 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
| + | == Reaction(s) of unknown directionality == |
| − | == Gene(s) associated with this reaction == | + | {{#set: common-name=a (1->4)-β-d-xylan oligosaccharide}} |
| − | * Gene: [[SJ19552]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ13010]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ17935]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | == Pathway(s) == | |
| − | * [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
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| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
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| − | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY-3821]], D-galactose detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] | |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | == External links == | |
| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P09608 P09608]
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| − | ** [http://www.uniprot.org/uniprot/Q01415 Q01415]
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| − | ** [http://www.uniprot.org/uniprot/P22713 P22713]
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| − | ** [http://www.uniprot.org/uniprot/P31767 P31767]
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| − | ** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
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| − | ** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
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| − | ** [http://www.uniprot.org/uniprot/P96993 P96993]
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| − | ** [http://www.uniprot.org/uniprot/P04385 P04385]
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| − | ** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
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| − | ** [http://www.uniprot.org/uniprot/P13227 P13227]
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| − | ** [http://www.uniprot.org/uniprot/P39574 P39574]
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| − | ** [http://www.uniprot.org/uniprot/P13045 P13045]
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| − | ** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=galactokinase}} | |
| − | {{#set: ec-number=ec-2.7.1.6}}
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| − | {{#set: nb gene associated=3}}
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| − | {{#set: nb pathway associated=4}}
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| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
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