Difference between revisions of "CPD-14018"

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(Created page with "Category:gene == Gene SJ04584 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * PROTEIN-KINASE-RXN **...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** left-to-right * common-name: ** 4-hydro...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ04584 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
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== Organism(s) associated with this gene ==
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* direction:
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* [[S.japonica_carotenoid_curated]]
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** left-to-right
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== Reaction(s) associated ==
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* common-name:
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* [[PROTEIN-KINASE-RXN]]
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** 4-hydroxy-tetrahydrodipicolinate synthase
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** Category: [[orthology]]
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* ec-number:
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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* synonymous:
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{{#set: nb reaction associated=1}}
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** dihydropicolinate synthetase
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** dihydrodipicolinic acid synthase
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== Reaction formula ==
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* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
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== Gene(s) associated with this reaction ==
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* Gene: [[SJ18863]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ21231]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
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** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P43797 P43797]
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** [http://www.uniprot.org/uniprot/O26892 O26892]
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** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
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** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
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** [http://www.uniprot.org/uniprot/P19808 P19808]
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** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
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** [http://www.uniprot.org/uniprot/O05969 O05969]
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** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
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** [http://www.uniprot.org/uniprot/Q04796 Q04796]
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** [http://www.uniprot.org/uniprot/Q57695 Q57695]
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** [http://www.uniprot.org/uniprot/O25657 O25657]
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** [http://www.uniprot.org/uniprot/O67216 O67216]
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** [http://www.uniprot.org/uniprot/O29352 O29352]
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** [http://www.uniprot.org/uniprot/O84366 O84366]
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** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
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** [http://www.uniprot.org/uniprot/P63945 P63945]
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** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
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** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
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** [http://www.uniprot.org/uniprot/Q43038 Q43038]
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** [http://www.uniprot.org/uniprot/P49423 P49423]
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** [http://www.uniprot.org/uniprot/Q55513 Q55513]
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** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
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** [http://www.uniprot.org/uniprot/Q42948 Q42948]
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** [http://www.uniprot.org/uniprot/Q42940 Q42940]
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** [http://www.uniprot.org/uniprot/O86841 O86841]
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** [http://www.uniprot.org/uniprot/P24847 P24847]
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** [http://www.uniprot.org/uniprot/P24846 P24846]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=4-hydroxy-tetrahydrodipicolinate synthase}}
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{{#set: ec-number=ec-4.3.3.7}}
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{{#set: synonymous=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:28, 27 August 2019

Reaction DIHYDRODIPICSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxy-tetrahydrodipicolinate synthase
  • ec-number:
  • synonymous:
    • dihydropicolinate synthetase
    • dihydrodipicolinic acid synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5097, L-lysine biosynthesis VI: PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II: PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III: PWY-2942
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-14018&oldid=34419"