Difference between revisions of "CPD-14158"

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(Created page with "Category:gene == Gene SJ19806 == * transcription-direction: ** negative * right-end-position: ** 113146 * left-end-position: ** 110136 * centisome-position: ** 50.090736...")
(Created page with "Category:metabolite == Metabolite CPD-14158 == * common-name: ** nebramycin 5' * smiles: ** c([n+])c1(c(cc(c(o1)oc2(c(c(c([n+])cc([n+])2)oc3(oc(c(c(c(o)3)[n+])o)coc(=o)n))...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ19806 ==
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== Metabolite CPD-14158 ==
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* transcription-direction:
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* common-name:
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** negative
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** nebramycin 5'
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* right-end-position:
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* smiles:
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** 113146
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** c([n+])c1(c(cc(c(o1)oc2(c(c(c([n+])cc([n+])2)oc3(oc(c(c(c(o)3)[n+])o)coc(=o)n))o))[n+])o)
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* left-end-position:
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* inchi-key:
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** 110136
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** yppfejhohnpklt-pbsuhmdjsa-s
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* centisome-position:
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* molecular-weight:
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** 50.090736   
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** 515.583
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13168]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-15284]]
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* [[1.1.1.145-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=nebramycin 5'}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=yppfejhohnpklt-pbsuhmdjsa-s}}
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* [[NADH-DEHYDROGENASE-RXN]]
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{{#set: molecular-weight=515.583}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12693]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12747]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12789]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-342]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-350]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-353]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6946]]
 
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** '''6''' reactions found over '''22''' reactions in the full pathway
 
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* [[PWY-6944]]
 
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** '''2''' reactions found over '''25''' reactions in the full pathway
 
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* [[PWY-6948]]
 
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** '''2''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY66-378]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7299]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=113146}}
 
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{{#set: left-end-position=110136}}
 
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{{#set: centisome-position=50.090736    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=8}}
 
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{{#set: nb pathway associated=5}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-14158

  • common-name:
    • nebramycin 5'
  • smiles:
    • c([n+])c1(c(cc(c(o1)oc2(c(c(c([n+])cc([n+])2)oc3(oc(c(c(c(o)3)[n+])o)coc(=o)n))o))[n+])o)
  • inchi-key:
    • yppfejhohnpklt-pbsuhmdjsa-s
  • molecular-weight:
    • 515.583

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-14158&oldid=136882"