Difference between revisions of "CPD-14158"

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(Created page with "Category:gene == Gene SJ19806 == * transcription-direction: ** negative * right-end-position: ** 113146 * left-end-position: ** 110136 * centisome-position: ** 50.090736...")
(Created page with "Category:metabolite == Metabolite CPD-10269 == * common-name: ** palmitoleoyl-coa * smiles: ** ccccccc=ccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o...")
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ19806 ==
+
== Metabolite CPD-10269 ==
* transcription-direction:
+
* common-name:
** negative
+
** palmitoleoyl-coa
* right-end-position:
+
* smiles:
** 113146
+
** ccccccc=ccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
* left-end-position:
+
* inchi-key:
** 110136
+
** qbyoccwnzaoztl-mdmkaecgsa-j
* centisome-position:
+
* molecular-weight:
** 50.090736   
+
** 999.899
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-10662]]
== Reaction(s) associated ==
+
* [[RXN-17008]]
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-17009]]
* [[1.1.1.145-RXN]]
+
* [[RXN-17019]]
** Category: [[annotation]]
+
* [[RXN-17788]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-9616]]
* [[NADH-DEHYDROGENASE-RXN]]
+
== Reaction(s) known to produce the compound ==
** Category: [[annotation]]
+
* [[RXN-10664]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-17787]]
* [[RXN-12693]]
+
* [[RXN0-7248]]
** Category: [[annotation]]
+
== Reaction(s) of unknown directionality ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: common-name=palmitoleoyl-coa}}
* [[RXN-12747]]
+
{{#set: inchi-key=inchikey=qbyoccwnzaoztl-mdmkaecgsa-j}}
** Category: [[annotation]]
+
{{#set: molecular-weight=999.899}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12789]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-342]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-350]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-353]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWY-6946]]
 
** '''6''' reactions found over '''22''' reactions in the full pathway
 
* [[PWY-6944]]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
* [[PWY-6948]]
 
** '''2''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY66-378]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7299]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=113146}}
 
{{#set: left-end-position=110136}}
 
{{#set: centisome-position=50.090736    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=8}}
 
{{#set: nb pathway associated=5}}
 

Revision as of 20:30, 18 December 2020

Metabolite CPD-10269

  • common-name:
    • palmitoleoyl-coa
  • smiles:
    • ccccccc=ccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • qbyoccwnzaoztl-mdmkaecgsa-j
  • molecular-weight:
    • 999.899

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality