Difference between revisions of "CPD-14273"

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(Created page with "Category:gene == Gene SJ20511 == * transcription-direction: ** negative * right-end-position: ** 130976 * left-end-position: ** 115943 * centisome-position: ** 55.965416...")
(Created page with "Category:metabolite == Metabolite CPD-14273 == * common-name: ** 3-oxo-lignoceroyl-coa * smiles: ** cccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)o...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ20511 ==
+
== Metabolite CPD-14273 ==
* transcription-direction:
+
* common-name:
** negative
+
** 3-oxo-lignoceroyl-coa
* right-end-position:
+
* smiles:
** 130976
+
** cccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
* left-end-position:
+
* inchi-key:
** 115943
+
** jjsjtiwfknschc-jbkavqfisa-j
* centisome-position:
+
* molecular-weight:
** 55.965416   
+
** 1128.113
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-13300]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[1.14.11.2-RXN]]
+
* [[RXN-13297]]
** Category: [[annotation]]
+
== Reaction(s) of unknown directionality ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: common-name=3-oxo-lignoceroyl-coa}}
* [[RXN490-3641]]
+
{{#set: inchi-key=inchikey=jjsjtiwfknschc-jbkavqfisa-j}}
** Category: [[orthology]]
+
{{#set: molecular-weight=1128.113}}
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7894]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=130976}}
 
{{#set: left-end-position=115943}}
 
{{#set: centisome-position=55.965416    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-14273

  • common-name:
    • 3-oxo-lignoceroyl-coa
  • smiles:
    • cccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
  • inchi-key:
    • jjsjtiwfknschc-jbkavqfisa-j
  • molecular-weight:
    • 1128.113

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality