Difference between revisions of "CPD-14273"

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(Created page with "Category:gene == Gene SJ18612 == * transcription-direction: ** positive * right-end-position: ** 96156 * left-end-position: ** 89996 * centisome-position: ** 37.244297...")
 
(Created page with "Category:metabolite == Metabolite CPD-14273 == * common-name: ** 3-oxo-lignoceroyl-coa * smiles: ** cccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)o...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ18612 ==
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== Metabolite CPD-14273 ==
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* transcription-direction:
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* common-name:
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** positive
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** 3-oxo-lignoceroyl-coa
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* right-end-position:
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* smiles:
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** 96156
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** cccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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* left-end-position:
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* inchi-key:
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** 89996
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** jjsjtiwfknschc-jbkavqfisa-j
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* centisome-position:
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* molecular-weight:
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** 37.244297   
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** 1128.113
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-13300]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[RXN-13297]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-oxo-lignoceroyl-coa}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=jjsjtiwfknschc-jbkavqfisa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1128.113}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=96156}}
 
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{{#set: left-end-position=89996}}
 
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{{#set: centisome-position=37.244297    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-14273

  • common-name:
    • 3-oxo-lignoceroyl-coa
  • smiles:
    • cccccccccccccccccccccc(=o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
  • inchi-key:
    • jjsjtiwfknschc-jbkavqfisa-j
  • molecular-weight:
    • 1128.113

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-14273&oldid=138267"