Difference between revisions of "CPD-14277"

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(Created page with "Category:gene == Gene SJ21412 == * transcription-direction: ** positive * right-end-position: ** 121891 * left-end-position: ** 113875 * centisome-position: ** 58.89274...")
(Created page with "Category:metabolite == Metabolite CPD-14277 == * common-name: ** (3r)-3-hydroxy-lignoceroyl-coa * smiles: ** cccccccccccccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21412 ==
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== Metabolite CPD-14277 ==
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* transcription-direction:
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* common-name:
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** positive
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** (3r)-3-hydroxy-lignoceroyl-coa
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* right-end-position:
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* smiles:
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** 121891
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** cccccccccccccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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* left-end-position:
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* inchi-key:
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** 113875
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** qibkbvrvofikln-ysowjfsksa-j
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* centisome-position:
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* molecular-weight:
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** 58.89274   
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** 1130.129
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-13304]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-7163]]
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* [[RXN-13300]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=(3r)-3-hydroxy-lignoceroyl-coa}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=qibkbvrvofikln-ysowjfsksa-j}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=1130.129}}
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== Pathway(s) associated ==
 
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* [[PWY-6554]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-4661]]
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-6362]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6372]]
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-6369]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6361]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=121891}}
 
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{{#set: left-end-position=113875}}
 
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{{#set: centisome-position=58.89274    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=1}}
 
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{{#set: nb pathway associated=6}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-14277

  • common-name:
    • (3r)-3-hydroxy-lignoceroyl-coa
  • smiles:
    • cccccccccccccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
  • inchi-key:
    • qibkbvrvofikln-ysowjfsksa-j
  • molecular-weight:
    • 1130.129

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-14277&oldid=136783"