Difference between revisions of "CPD-15035"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** left-to-right * common-name: ** phosphoribosylanthranil...")
(Created page with "Category:metabolite == Metabolite CPD-15035 == * common-name: ** 4-deoxy-β-d-gluc-4-enuronosyl-2-sulfate-(1,3)-n-acetyl-β-d-galactosamine * smiles: ** cc(=o)nc2(...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
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== Metabolite CPD-15035 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** phosphoribosylanthranilate isomerase
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** 4-deoxy-β-d-gluc-4-enuronosyl-2-sulfate-(1,3)-n-acetyl-β-d-galactosamine
* ec-number:
+
* smiles:
** [http://enzyme.expasy.org/EC/5.3.1.24 ec-5.3.1.24]
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** cc(=o)nc2(c(oc1(oc(c(=o)[o-])=cc(o)c(os([o-])(=o)=o)1))c(o)c(co)oc(o)2)
== Reaction formula ==
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* inchi-key:
* 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
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** zeucjyoqjtzlfj-rbcdgzsosa-l
== Gene(s) associated with this reaction  ==
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* molecular-weight:
* Gene: [[SJ17722]]
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** 457.362
** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-14021]]
* Gene: [[SJ01083]]
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== Reaction(s) known to produce the compound ==
** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=4-deoxy-β-d-gluc-4-enuronosyl-2-sulfate-(1,3)-n-acetyl-β-d-galactosamine}}
** Category: [[orthology]]
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{{#set: inchi-key=inchikey=zeucjyoqjtzlfj-rbcdgzsosa-l}}
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=457.362}}
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s) ==
 
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21541 21541]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P16923 P16923]
 
** [http://www.uniprot.org/uniprot/O67853 O67853]
 
** [http://www.uniprot.org/uniprot/P12289 P12289]
 
** [http://www.uniprot.org/uniprot/P42393 P42393]
 
** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
 
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
 
** [http://www.uniprot.org/uniprot/P20167 P20167]
 
** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
 
** [http://www.uniprot.org/uniprot/P00910 P00910]
 
** [http://www.uniprot.org/uniprot/P00909 P00909]
 
** [http://www.uniprot.org/uniprot/P00912 P00912]
 
** [http://www.uniprot.org/uniprot/P13997 P13997]
 
** [http://www.uniprot.org/uniprot/P50857 P50857]
 
** [http://www.uniprot.org/uniprot/P27710 P27710]
 
** [http://www.uniprot.org/uniprot/P17218 P17218]
 
** [http://www.uniprot.org/uniprot/P00908 P00908]
 
** [http://www.uniprot.org/uniprot/P18483 P18483]
 
** [http://www.uniprot.org/uniprot/Q02002 Q02002]
 
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
 
** [http://www.uniprot.org/uniprot/Q01128 Q01128]
 
** [http://www.uniprot.org/uniprot/P74435 P74435]
 
** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=phosphoribosylanthranilate isomerase}}
 
{{#set: ec-number=ec-5.3.1.24}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite CPD-15035

  • common-name:
    • 4-deoxy-β-d-gluc-4-enuronosyl-2-sulfate-(1,3)-n-acetyl-β-d-galactosamine
  • smiles:
    • cc(=o)nc2(c(oc1(oc(c(=o)[o-])=cc(o)c(os([o-])(=o)=o)1))c(o)c(co)oc(o)2)
  • inchi-key:
    • zeucjyoqjtzlfj-rbcdgzsosa-l
  • molecular-weight:
    • 457.362

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality