Difference between revisions of "CPD-15104"

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(Created page with "Category:gene == Gene SJ10422 == * transcription-direction: ** negative * right-end-position: ** 18996 * left-end-position: ** 11430 * centisome-position: ** 37.811375...")
 
(Created page with "Category:metabolite == Metabolite CPD-15104 == * common-name: ** (r)-3-hydroxy-3-methyl-2-oxopentanoate * smiles: ** ccc(o)(c)c(=o)c(=o)[o-] * inchi-key: ** yjvowrawfxresp...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ10422 ==
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== Metabolite CPD-15104 ==
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* transcription-direction:
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* common-name:
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** negative
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** (r)-3-hydroxy-3-methyl-2-oxopentanoate
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* right-end-position:
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* smiles:
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** 18996
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** ccc(o)(c)c(=o)c(=o)[o-]
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* left-end-position:
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* inchi-key:
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** 11430
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** yjvowrawfxresp-zcfiwibfsa-m
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* centisome-position:
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* molecular-weight:
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** 37.811375   
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** 145.135
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[KARI_LPAREN_23dhmp_RPAREN_]]
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== Reaction(s) associated ==
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* [[RXN-14106]]
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* [[NADH-DEHYDROG-A-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[RXN-14106]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=(r)-3-hydroxy-3-methyl-2-oxopentanoate}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=yjvowrawfxresp-zcfiwibfsa-m}}
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* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
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{{#set: molecular-weight=145.135}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[NADH-DEHYDROGENASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5330]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY0-1335]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-4302]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-3781]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1334]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6692]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-5083]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7279]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1573]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7269]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1568]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1567]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=18996}}
 
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{{#set: left-end-position=11430}}
 
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{{#set: centisome-position=37.811375    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=11}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-15104

  • common-name:
    • (r)-3-hydroxy-3-methyl-2-oxopentanoate
  • smiles:
    • ccc(o)(c)c(=o)c(=o)[o-]
  • inchi-key:
    • yjvowrawfxresp-zcfiwibfsa-m
  • molecular-weight:
    • 145.135

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15104&oldid=137858"