Difference between revisions of "CPD-15125"

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(Created page with "Category:gene == Gene SJ06337 == * transcription-direction: ** positive * right-end-position: ** 170322 * left-end-position: ** 156756 * centisome-position: ** 32.728138...")
(Created page with "Category:metabolite == Metabolite CPD-13378 == * common-name: ** xllg xyloglucan oligosaccharide * smiles: ** c9(c(c(c(c(occ8(oc(oc3(c(o)c(o)c(oc(coc1(c(c(c(co1)o)o)oc2(c(...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ06337 ==
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== Metabolite CPD-13378 ==
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* transcription-direction:
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* common-name:
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** positive
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** xllg xyloglucan oligosaccharide
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* right-end-position:
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* smiles:
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** 170322
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** c9(c(c(c(c(occ8(oc(oc3(c(o)c(o)c(oc(coc1(c(c(c(co1)o)o)oc2(c(c(c(c(o2)co)o)o)o)))3)oc6(c(o)c(o)c(oc(coc4(c(c(c(co4)o)o)oc5(c(c(c(c(o5)co)o)o)o)))6)oc7(c(o)c(o)c(o)oc(co)7))))c(o)c(o)c(o)8))o9)o)o)o)
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* left-end-position:
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* inchi-key:
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** 156756
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** gschigxdtvyeem-migiythbsa-n
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* centisome-position:
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* molecular-weight:
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** 32.728138   
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** 1387.215
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-12400]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-11361]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=xllg xyloglucan oligosaccharide}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=gschigxdtvyeem-migiythbsa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1387.215}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-12473]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN0-6359]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[THIOSULFATE-SULFURTRANSFERASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-6823]]
 
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** '''7''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5350]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=170322}}
 
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{{#set: left-end-position=156756}}
 
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{{#set: centisome-position=32.728138    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=2}}
 

Revision as of 20:31, 18 December 2020

Metabolite CPD-13378

  • common-name:
    • xllg xyloglucan oligosaccharide
  • smiles:
    • c9(c(c(c(c(occ8(oc(oc3(c(o)c(o)c(oc(coc1(c(c(c(co1)o)o)oc2(c(c(c(c(o2)co)o)o)o)))3)oc6(c(o)c(o)c(oc(coc4(c(c(c(co4)o)o)oc5(c(c(c(c(o5)co)o)o)o)))6)oc7(c(o)c(o)c(o)oc(co)7))))c(o)c(o)c(o)8))o9)o)o)o)
  • inchi-key:
    • gschigxdtvyeem-migiythbsa-n
  • molecular-weight:
    • 1387.215

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15125&oldid=45941"