Difference between revisions of "CPD-15435"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7904 RXN-7904] == * direction: ** left-to-right * common-name: ** acyl-coa synthetase ** long-c...")
(Created page with "Category:metabolite == Metabolite CPD-15435 == * common-name: ** l-threonylcarbamoyladenylate * smiles: ** cc(o)c(c([o-])=o)nc(=o)op(occ3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7904 RXN-7904] ==
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== Metabolite CPD-15435 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** acyl-coa synthetase
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** l-threonylcarbamoyladenylate
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** long-chain fatty acid-coa ligase
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* smiles:
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* ec-number:
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** cc(o)c(c([o-])=o)nc(=o)op(occ3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))([o-])=o
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** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
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* inchi-key:
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== Reaction formula ==
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** ghlupquheijrcu-dwvddhqfsa-l
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[PPI]][c]
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* molecular-weight:
−
== Gene(s) associated with this reaction  ==
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** 490.322
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
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* Gene: [[SJ05591]]
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* [[RXN-14569]]
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** Category: [[annotation]]
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* [[RXN-14570]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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== Reaction(s) known to produce the compound ==
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* Gene: [[SJ03650]]
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* [[RXN-14569]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=l-threonylcarbamoyladenylate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=ghlupquheijrcu-dwvddhqfsa-l}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
{{#set: molecular-weight=490.322}}
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* Gene: [[SJ08691]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ08690]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ08692]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ13972]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
−
== Pathway(s) ==
 
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* [[PWY-6803]], phosphatidylcholine acyl editing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6803 PWY-6803]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5885]], wax esters biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5885 PWY-5885]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5143]], long-chain fatty acid activation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5143 PWY-5143]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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* [[PWY-6873]], long chain fatty acid ester synthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6873 PWY-6873]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7033]], alkane biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7033 PWY-7033]
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15422 15422]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/O60135 O60135]
 
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** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
 
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** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
 
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** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
 
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** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
 
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** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
 
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** [http://www.uniprot.org/uniprot/Q96338 Q96338]
 
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** [http://www.uniprot.org/uniprot/Q96538 Q96538]
 
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** [http://www.uniprot.org/uniprot/Q96537 Q96537]
 
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** [http://www.uniprot.org/uniprot/O15840 O15840]
 
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** [http://www.uniprot.org/uniprot/O81614 O81614]
 
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** [http://www.uniprot.org/uniprot/P73004 P73004]
 
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** [http://www.uniprot.org/uniprot/P47912 P47912]
 
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** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
 
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** [http://www.uniprot.org/uniprot/P69452 P69452]
 
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** [http://www.uniprot.org/uniprot/P69451 P69451]
 
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** [http://www.uniprot.org/uniprot/Q02602 Q02602]
 
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** [http://www.uniprot.org/uniprot/P30624 P30624]
 
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** [http://www.uniprot.org/uniprot/P33124 P33124]
 
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** [http://www.uniprot.org/uniprot/P33121 P33121]
 
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** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
 
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** [http://www.uniprot.org/uniprot/O51539 O51539]
 
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** [http://www.uniprot.org/uniprot/O30039 O30039]
 
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** [http://www.uniprot.org/uniprot/P44446 P44446]
 
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** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
 
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** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
 
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** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
 
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** [http://www.uniprot.org/uniprot/P94547 P94547]
 
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** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
 
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** [http://www.uniprot.org/uniprot/O83181 O83181]
 
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** [http://www.uniprot.org/uniprot/Q10776 Q10776]
 
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** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
 
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** [http://www.uniprot.org/uniprot/P39002 P39002]
 
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** [http://www.uniprot.org/uniprot/O51162 O51162]
 
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** [http://www.uniprot.org/uniprot/P39518 P39518]
 
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** [http://www.uniprot.org/uniprot/P18163 P18163]
 
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* PIR:
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A36275 A36275]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54901 A54901]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A70117 A70117]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B54901 B54901]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B75585 B75585]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C70762 C70762]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C71361 C71361]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C75364 C75364]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69649 D69649]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D72605 D72605]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F86707 F86707]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81798 G81798]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64041 H64041]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H69274 H69274]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70173 H70173]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H81068 H81068]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JE0262 JE0262]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0202 JX0202]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0205 JX0205]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S23052 S23052]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S23467 S23467]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41589 S41589]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S49487 S49487]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56060 S56060]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74984 S74984]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T01875 T01875]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T02834 T02834]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07928 T07928]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07929 T07929]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07944 T07944]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08182 T08182]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08904 T08904]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T34994 T34994]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T35430 T35430]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T35513 T35513]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T39766 T39766]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00390 R00390]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=acyl-coa synthetase|long-chain fatty acid-coa ligase}}
 
−
{{#set: ec-number=ec-6.2.1.3}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:18, 18 March 2021

Metabolite CPD-15435

  • common-name:
    • l-threonylcarbamoyladenylate
  • smiles:
    • cc(o)c(c([o-])=o)nc(=o)op(occ3(c(c(c(n2(c1(=c(c(=nc=n1)n)n=c2)))o3)o)o))([o-])=o
  • inchi-key:
    • ghlupquheijrcu-dwvddhqfsa-l
  • molecular-weight:
    • 490.322

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15435&oldid=139780"