Difference between revisions of "CPD-15667"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] == * direction: ** left-to-right * com...")
(Created page with "Category:metabolite == Metabolite CPD-15667 == * common-name: ** 6-cis, 3-oxo-tridecenoyl-coa * smiles: ** ccccccc=cccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] ==
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== Metabolite CPD-15667 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** pantothenate synthetase
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** 6-cis, 3-oxo-tridecenoyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/6.3.2.1 ec-6.3.2.1]
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** ccccccc=cccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[ATP]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[L-PANTOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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** fdxhxlpclxeysu-dxazuofzsa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ13797]]
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** 971.802
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-14774]]
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** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=6-cis, 3-oxo-tridecenoyl-coa}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: inchi-key=inchikey=fdxhxlpclxeysu-dxazuofzsa-j}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=971.802}}
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== Pathway(s) ==
 
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10913 10913]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P31663 P31663]
 
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** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
 
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** [http://www.uniprot.org/uniprot/P56061 P56061]
 
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** [http://www.uniprot.org/uniprot/P57035 P57035]
 
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** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
 
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** [http://www.uniprot.org/uniprot/Q09673 Q09673]
 
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** [http://www.uniprot.org/uniprot/O24210 O24210]
 
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** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=pantothenate synthetase}}
 
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{{#set: ec-number=ec-6.3.2.1}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite CPD-15667

  • common-name:
    • 6-cis, 3-oxo-tridecenoyl-coa
  • smiles:
    • ccccccc=cccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • fdxhxlpclxeysu-dxazuofzsa-j
  • molecular-weight:
    • 971.802

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15667&oldid=139734"