Difference between revisions of "CPD-15684"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == * direction: ** left-to-right * common-name...")
(Created page with "Category:metabolite == Metabolite CPD-15684 == * common-name: ** 5-cis, 7-trans-tetradecadienoyl-coa * smiles: ** ccccccc=cc=ccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(o...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] ==
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== Metabolite CPD-15684 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** amp phosphatase
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** 5-cis, 7-trans-tetradecadienoyl-coa
** 5'-nucleotidase
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* smiles:
* ec-number:
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** ccccccc=cc=ccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
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* inchi-key:
== Reaction formula ==
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** amanzgdvbadzlh-qtjplklfsa-j
* 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c]
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* molecular-weight:
== Gene(s) associated with this reaction  ==
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** 969.83
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
* Gene: [[SJ18895]]
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* [[RXN-14796]]
** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) of unknown directionality ==
* Gene: [[SJ15366]]
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{{#set: common-name=5-cis, 7-trans-tetradecadienoyl-coa}}
** Category: [[annotation]]
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{{#set: inchi-key=inchikey=amanzgdvbadzlh-qtjplklfsa-j}}
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: molecular-weight=969.83}}
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ09030]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ18402]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ16098]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
== Pathway(s) ==
 
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29376 29376]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P06196 P06196]
 
** [http://www.uniprot.org/uniprot/P21588 P21588]
 
** [http://www.uniprot.org/uniprot/O34313 O34313]
 
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
 
** [http://www.uniprot.org/uniprot/O29385 O29385]
 
** [http://www.uniprot.org/uniprot/P44569 P44569]
 
** [http://www.uniprot.org/uniprot/O83142 O83142]
 
** [http://www.uniprot.org/uniprot/P49902 P49902]
 
** [http://www.uniprot.org/uniprot/P22848 P22848]
 
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
 
** [http://www.uniprot.org/uniprot/P21589 P21589]
 
** [http://www.uniprot.org/uniprot/P29240 P29240]
 
** [http://www.uniprot.org/uniprot/P07024 P07024]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=5'-nucleotidase|amp phosphatase}}
 
{{#set: ec-number=ec-3.1.3.5}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite CPD-15684

  • common-name:
    • 5-cis, 7-trans-tetradecadienoyl-coa
  • smiles:
    • ccccccc=cc=ccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • amanzgdvbadzlh-qtjplklfsa-j
  • molecular-weight:
    • 969.83

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality