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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == | + | == Metabolite 1-KETO-2-METHYLVALERATE == |
| − | * direction:
| |
| − | ** left-to-right
| |
| | * common-name: | | * common-name: |
| − | ** amp phosphatase | + | ** (r)-2,3-dihydroxy-3-methylpentanoate |
| − | ** 5'-nucleotidase
| + | * smiles: |
| − | * ec-number: | + | ** ccc(o)(c)c(c([o-])=o)o |
| − | ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] | + | * inchi-key: |
| − | == Reaction formula ==
| + | ** pdgxjdxvgmhuir-ujursfkzsa-m |
| − | * 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c]
| + | * molecular-weight: |
| − | == Gene(s) associated with this reaction == | + | ** 147.15 |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | == Reaction(s) known to consume the compound == |
| − | * Gene: [[SJ18895]]
| + | * [[DIHYDROXYMETVALDEHYDRAT-RXN]] |
| − | ** Category: [[annotation]]
| + | == Reaction(s) known to produce the compound == |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | * [[ACETOOHBUTREDUCTOISOM-RXN]] |
| − | * Gene: [[SJ15366]] | + | * [[KARI_LPAREN_23dhmp_RPAREN_]] |
| − | ** Category: [[annotation]]
| + | == Reaction(s) of unknown directionality == |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: common-name=(r)-2,3-dihydroxy-3-methylpentanoate}} |
| − | ** Category: [[orthology]]
| + | {{#set: inchi-key=inchikey=pdgxjdxvgmhuir-ujursfkzsa-m}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: molecular-weight=147.15}} |
| − | * Gene: [[SJ09030]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | * Gene: [[SJ18402]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ16098]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]] | |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) == | |
| − | * [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY] | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| |
| − | == Reconstruction information == | |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
| − | == External links == | |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29376 29376]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P06196 P06196]
| |
| − | ** [http://www.uniprot.org/uniprot/P21588 P21588]
| |
| − | ** [http://www.uniprot.org/uniprot/O34313 O34313]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
| |
| − | ** [http://www.uniprot.org/uniprot/O29385 O29385]
| |
| − | ** [http://www.uniprot.org/uniprot/P44569 P44569]
| |
| − | ** [http://www.uniprot.org/uniprot/O83142 O83142]
| |
| − | ** [http://www.uniprot.org/uniprot/P49902 P49902]
| |
| − | ** [http://www.uniprot.org/uniprot/P22848 P22848]
| |
| − | ** [http://www.uniprot.org/uniprot/Q05927 Q05927]
| |
| − | ** [http://www.uniprot.org/uniprot/P21589 P21589]
| |
| − | ** [http://www.uniprot.org/uniprot/P29240 P29240]
| |
| − | ** [http://www.uniprot.org/uniprot/P07024 P07024]
| |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=5'-nucleotidase|amp phosphatase}} | |
| − | {{#set: ec-number=ec-3.1.3.5}}
| |
| − | {{#set: nb gene associated=5}} | |
| − | {{#set: nb pathway associated=1}}
| |
| − | {{#set: reconstruction category=annotation|orthology}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
| |
