Difference between revisions of "CPD-15685"

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(Created page with "Category:gene == Gene SJ02442 == * transcription-direction: ** negative * right-end-position: ** 134560 * left-end-position: ** 131842 * centisome-position: ** 97.21714...")
(Created page with "Category:metabolite == Metabolite CPD-15685 == * common-name: ** 2-trans, 5-cis, 7-trans-tetradecatrienoyl-coa * smiles: ** ccccccc=cc=ccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ02442 ==
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== Metabolite CPD-15685 ==
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* transcription-direction:
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* common-name:
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** negative
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** 2-trans, 5-cis, 7-trans-tetradecatrienoyl-coa
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* right-end-position:
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* smiles:
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** 134560
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** ccccccc=cc=ccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 131842
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** xpvhxtguzgacru-mcfmhthasa-j
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* centisome-position:
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* molecular-weight:
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** 97.21714   
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** 967.814
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14797]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-14796]]
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* [[GSHTRAN-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=2-trans, 5-cis, 7-trans-tetradecatrienoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=xpvhxtguzgacru-mcfmhthasa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=967.814}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[GST-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-13673]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-15680]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6842]]
 
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** '''5''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-4061]]
 
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** '''4''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY66-374]]
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7112]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7533]]
 
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** '''3''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=134560}}
 
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{{#set: left-end-position=131842}}
 
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{{#set: centisome-position=97.21714    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=5}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-15685

  • common-name:
    • 2-trans, 5-cis, 7-trans-tetradecatrienoyl-coa
  • smiles:
    • ccccccc=cc=ccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • xpvhxtguzgacru-mcfmhthasa-j
  • molecular-weight:
    • 967.814

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15685&oldid=136667"