Difference between revisions of "CPD-15686"

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(Created page with "Category:gene == Gene SJ06221 == * transcription-direction: ** positive * right-end-position: ** 73362 * left-end-position: ** 69367 * centisome-position: ** 14.453265...")
 
(Created page with "Category:metabolite == Metabolite CPD-15686 == * common-name: ** (3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa * smiles: ** ccccccc=cc=ccc(o)cc(=o)sccnc(=o)ccnc(=o)c(o...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ06221 ==
+
== Metabolite CPD-15686 ==
* transcription-direction:
+
* common-name:
** positive
+
** (3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa
* right-end-position:
+
* smiles:
** 73362
+
** ccccccc=cc=ccc(o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
* left-end-position:
+
* inchi-key:
** 69367
+
** zzvzpdqtnsjqpz-voxmgfccsa-j
* centisome-position:
+
* molecular-weight:
** 14.453265   
+
** 985.829
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
== Reaction(s) known to produce the compound ==
== Reaction(s) associated ==
+
* [[RXN-14797]]
* [[2.4.1.198-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=(3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=zzvzpdqtnsjqpz-voxmgfccsa-j}}
** Category: [[orthology]]
+
{{#set: molecular-weight=985.829}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-6558]]
 
** '''7''' reactions found over '''13''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=73362}}
 
{{#set: left-end-position=69367}}
 
{{#set: centisome-position=14.453265    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-15686

  • common-name:
    • (3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa
  • smiles:
    • ccccccc=cc=ccc(o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • zzvzpdqtnsjqpz-voxmgfccsa-j
  • molecular-weight:
    • 985.829

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality