Difference between revisions of "CPD-15692"

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(Created page with "Category:gene == Gene SJ12670 == * transcription-direction: ** negative * right-end-position: ** 89698 * left-end-position: ** 50762 * centisome-position: ** 14.256387...")
(Created page with "Category:metabolite == Metabolite CPD-15692 == * common-name: ** (3e)-dec-3-enoyl-coa * smiles: ** ccccccc=ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-]...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ12670 ==
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== Metabolite CPD-15692 ==
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* transcription-direction:
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* common-name:
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** negative
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** (3e)-dec-3-enoyl-coa
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* right-end-position:
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* smiles:
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** 89698
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** ccccccc=ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 50762
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** cqgvnmqhzqjnii-zjzqahhtsa-j
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* centisome-position:
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* molecular-weight:
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** 14.256387   
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** 915.738
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-14803]]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=(3e)-dec-3-enoyl-coa}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=cqgvnmqhzqjnii-zjzqahhtsa-j}}
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* [[BIOTIN-CARBOXYL-RXN]]
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{{#set: molecular-weight=915.738}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[DALADALALIG-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[PCr]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* [[PYRUVATE-CARBOXYLASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-7388]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6679]]
 
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** '''1''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5744]]
 
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** '''4''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5743]]
 
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** '''5''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5789]]
 
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** '''8''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY0-1264]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7953]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6386]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6387]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5750]]
 
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** '''3''' reactions found over '''2''' reactions in the full pathway
 
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* [[P42-PWY]]
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY66-399]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-6146]]
 
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** '''9''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6142]]
 
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** '''10''' reactions found over '''13''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=89698}}
 
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{{#set: left-end-position=50762}}
 
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{{#set: centisome-position=14.256387    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=14}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-15692

  • common-name:
    • (3e)-dec-3-enoyl-coa
  • smiles:
    • ccccccc=ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • cqgvnmqhzqjnii-zjzqahhtsa-j
  • molecular-weight:
    • 915.738

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15692&oldid=136930"