Difference between revisions of "CPD-16758"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11322 RXN-11322] == * direction: ** left-to-right * common-name: ** pyridoxal 5'-phosphate synt...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed-BIOTIN TransportSeed-BIOTIN] == * direction: ** left-to-right == Reaction formula ==...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11322 RXN-11322] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed-BIOTIN TransportSeed-BIOTIN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** pyridoxal 5'-phosphate synthase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.3.3.6 ec-4.3.3.6]
 
* synonymous:
 
** pyridoxal 5'-phosphate synthase subunit pdxs
 
** glutamine amidotransferase subunit pdxt
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-15895]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[WATER]][c]
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* 1.0 [[BIOTIN]][e] '''=>''' 1.0 [[BIOTIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10267]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19163]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6466]], pyridoxal 5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6466 PWY-6466]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[unknown-tool]]; comment: added to manage seeds from extracellular to cytosol compartment
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31508 31508]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07456 R07456]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=pyridoxal 5'-phosphate synthase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-4.3.3.6}}
+
{{#set: nb pathway associated=0}}
{{#set: synonymous=pyridoxal 5'-phosphate synthase subunit pdxs|glutamine amidotransferase subunit pdxt}}
+
{{#set: reconstruction category=manual}}
{{#set: nb gene associated=2}}
+
{{#set: reconstruction tool=unknown-tool}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:24, 26 August 2019

Reaction TransportSeed-BIOTIN

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links