Difference between revisions of "CPD-17063"

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(Created page with "Category:gene == Gene SJ17411 == * transcription-direction: ** positive * right-end-position: ** 151789 * left-end-position: ** 144911 * centisome-position: ** 55.11433...")
(Created page with "Category:metabolite == Metabolite CPD-17063 == * common-name: ** ferroheme o * smiles: ** c=cc4(=c(c)c8(=[n+]5([fe--]26([n+]1(=c(c(c)=c(ccc(=o)[o-])c1=cc3(n2c(=c(c)c(ccc(=...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ17411 ==
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== Metabolite CPD-17063 ==
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* transcription-direction:
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* common-name:
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** positive
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** ferroheme o
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* right-end-position:
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* smiles:
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** 151789
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** c=cc4(=c(c)c8(=[n+]5([fe--]26([n+]1(=c(c(c)=c(ccc(=o)[o-])c1=cc3(n2c(=c(c)c(ccc(=o)[o-])=3)c=c45))c=c7(c(c)=c(c(o)ccc=c(ccc=c(c)ccc=c(c)c)c)c(n67)=c8))))))
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* left-end-position:
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* inchi-key:
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** 144911
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** fispassvcdrerw-arqjtvbpsa-j
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* centisome-position:
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* molecular-weight:
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** 55.11433   
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** 836.852
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[HEMEOSYN-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[5.3.4.1-RXN]]
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{{#set: common-name=ferroheme o}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=fispassvcdrerw-arqjtvbpsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=836.852}}
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[DISULISOM-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-15684]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[THIOL-OXIDASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6797]]
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-6147]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7539]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7533]]
 
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** '''3''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=151789}}
 
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{{#set: left-end-position=144911}}
 
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{{#set: centisome-position=55.11433    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=6}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-17063

  • common-name:
    • ferroheme o
  • smiles:
    • c=cc4(=c(c)c8(=[n+]5([fe--]26([n+]1(=c(c(c)=c(ccc(=o)[o-])c1=cc3(n2c(=c(c)c(ccc(=o)[o-])=3)c=c45))c=c7(c(c)=c(c(o)ccc=c(ccc=c(c)ccc=c(c)c)c)c(n67)=c8))))))
  • inchi-key:
    • fispassvcdrerw-arqjtvbpsa-j
  • molecular-weight:
    • 836.852

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17063&oldid=138198"